Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Gm15846-201ENSMUST00000116022 320 ntBASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Gm12304-201ENSMUST00000120312 385 ntBASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Gm22537-201ENSMUST00000158172 199 ntBASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Gm22433-201ENSMUST00000158550 142 ntBASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Gm22853-201ENSMUST00000174974 131 ntBASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Gm29167-201ENSMUST00000190024 377 ntBASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.02□□□□□ -1.93
Ddx55Q6ZPL9 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Gm22784-201ENSMUST00000104088 132 ntBASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Gm24126-201ENSMUST00000104111 106 ntBASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Gm12042-201ENSMUST00000120479 301 ntBASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Gm23982-201ENSMUST00000157141 106 ntBASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Gm25235-201ENSMUST00000179933 107 ntBASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Gm27527-201ENSMUST00000183903 99 ntBASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Gm38311-201ENSMUST00000192945 165 ntBASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Gm44853-201ENSMUST00000209070 250 ntBASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Ddx55Q6ZPL9 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm24640-201ENSMUST00000116949 126 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm22626-201ENSMUST00000116990 126 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm11253-201ENSMUST00000118486 201 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm22215-201ENSMUST00000157558 96 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm24761-201ENSMUST00000179589 127 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm22450-201ENSMUST00000179641 107 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm24488-201ENSMUST00000179934 127 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm25701-201ENSMUST00000179988 127 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm25473-201ENSMUST00000180191 107 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm26431-201ENSMUST00000180199 127 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm27369-201ENSMUST00000185182 71 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm19123-201ENSMUST00000190716 651 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm24856-201ENSMUST00000082809 107 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm26071-201ENSMUST00000083261 107 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm24521-201ENSMUST00000083958 107 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm38071-201ENSMUST00000195792 3378 ntBASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ddx55Q6ZPL9 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Ddx55Q6ZPL9 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Gm23013-201ENSMUST00000104146 106 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Gm23705-201ENSMUST00000104370 130 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Gm12550-201ENSMUST00000118478 329 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Gm22330-201ENSMUST00000158068 115 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Gm24210-201ENSMUST00000158263 133 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Gm25457-201ENSMUST00000179509 107 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Gm17067-202ENSMUST00000180131 123 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Gm29657-201ENSMUST00000189807 342 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Gm22978-201ENSMUST00000082607 160 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.99□□□□□ -1.93
Ddx55Q6ZPL9 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Gm12771-201ENSMUST00000120246 135 ntBASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Gm25625-201ENSMUST00000157221 96 ntBASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Gm23588-201ENSMUST00000157659 99 ntBASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Gm5224-201ENSMUST00000183060 350 ntBASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Gm27796-201ENSMUST00000183863 261 ntBASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Gm27959-201ENSMUST00000185172 111 ntBASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Gm28453-203ENSMUST00000187041 189 ntBASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.98□□□□□ -1.93
Ddx55Q6ZPL9 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm24079-201ENSMUST00000104352 132 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm26015-201ENSMUST00000104402 125 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm22713-201ENSMUST00000116895 130 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm23841-201ENSMUST00000116951 114 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm25024-201ENSMUST00000179667 104 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Mir6405-201ENSMUST00000184584 124 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Mir6540-201ENSMUST00000184886 108 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm25482-201ENSMUST00000083225 107 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm24164-201ENSMUST00000093663 104 ntBASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.97□□□□□ -1.93
Ddx55Q6ZPL9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms