Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Mir7226-201ENSMUST00000184953 60 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm44858-201ENSMUST00000207360 154 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm6109-201ENSMUST00000223297 348 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm24152-201ENSMUST00000082764 163 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Mir322-201ENSMUST00000083484 95 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm14803-201ENSMUST00000117163 361 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm6829-201ENSMUST00000119858 360 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm24237-201ENSMUST00000157790 132 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm23642-201ENSMUST00000157858 258 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm23033-201ENSMUST00000157996 134 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm16326-201ENSMUST00000162843 414 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Mir7661-201ENSMUST00000197023 61 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm24313-201ENSMUST00000082561 133 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.69□□□□□ -1.98
Ddx58Q6Q899 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Gm26077-201ENSMUST00000104064 123 ntBASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Gm23548-201ENSMUST00000158963 106 ntBASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Gm28579-201ENSMUST00000186143 369 ntBASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Gm28408-201ENSMUST00000191557 463 ntBASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Gm45522-201ENSMUST00000210784 166 ntBASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Gm23851-201ENSMUST00000083831 103 ntBASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.68□□□□□ -1.98
Ddx58Q6Q899 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
Ddx58Q6Q899 Gm12351-201ENSMUST00000118727 292 ntBASIC2.67□□□□□ -1.98
Ddx58Q6Q899 Gm13913-201ENSMUST00000121126 260 ntBASIC2.67□□□□□ -1.98
Ddx58Q6Q899 Gm24598-201ENSMUST00000122510 74 ntBASIC2.67□□□□□ -1.98
Ddx58Q6Q899 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ddx58Q6Q899 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.67□□□□□ -1.98
Ddx58Q6Q899 Mir222-201ENSMUST00000083537 79 ntBASIC2.67□□□□□ -1.98
Ddx58Q6Q899 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.67□□□□□ -1.98
Ddx58Q6Q899 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Ddx58Q6Q899 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.67□□□□□ -1.98
Ddx58Q6Q899 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Mir1b-201ENSMUST00000117012 122 ntBASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Gm22114-201ENSMUST00000177756 107 ntBASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Gm29167-201ENSMUST00000190024 377 ntBASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Mir1291-201ENSMUST00000199842 117 ntBASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Gm45386-201ENSMUST00000210194 218 ntBASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Snora34-201ENSMUST00000083402 138 ntBASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Ddx58Q6Q899 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Ddx58Q6Q899 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.65□□□□□ -1.98
Ddx58Q6Q899 Gm24098-201ENSMUST00000102075 109 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm25381-201ENSMUST00000102078 109 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm12235-201ENSMUST00000118596 170 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm12647-201ENSMUST00000118977 265 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm25321-201ENSMUST00000122558 102 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm24896-201ENSMUST00000122741 135 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm24630-201ENSMUST00000122768 106 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm25115-201ENSMUST00000157187 140 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm29512-201ENSMUST00000185544 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28110-201ENSMUST00000185782 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm29057-201ENSMUST00000186468 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm29661-201ENSMUST00000186781 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28737-201ENSMUST00000186808 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm29118-201ENSMUST00000186908 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28433-201ENSMUST00000187085 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28759-201ENSMUST00000187621 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28831-201ENSMUST00000187739 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28200-201ENSMUST00000187778 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28752-201ENSMUST00000188340 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm29378-201ENSMUST00000188723 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28569-201ENSMUST00000188748 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28120-201ENSMUST00000188812 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28369-201ENSMUST00000188993 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm29037-201ENSMUST00000189092 313 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28909-201ENSMUST00000189406 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm28861-201ENSMUST00000189681 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm29180-201ENSMUST00000190003 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm29575-201ENSMUST00000190597 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm29469-201ENSMUST00000191448 315 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm37713-201ENSMUST00000191746 198 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm25820-202ENSMUST00000197479 128 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Mir3069-201ENSMUST00000198802 65 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm23345-201ENSMUST00000083817 150 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.65□□□□□ -1.99
Ddx58Q6Q899 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 123.4 ms