Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 Gm46389-201ENSMUST00000223199 392 ntBASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 Mir29c-201ENSMUST00000083614 88 ntBASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm23472-201ENSMUST00000101806 191 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm14678-201ENSMUST00000121396 482 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm13433-201ENSMUST00000121701 240 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm22083-201ENSMUST00000157586 102 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm24497-201ENSMUST00000177868 191 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm25939-201ENSMUST00000179876 191 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm42807-201ENSMUST00000200141 329 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm23625-201ENSMUST00000082457 100 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm24356-201ENSMUST00000082859 106 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm23444-201ENSMUST00000082922 191 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm25512-201ENSMUST00000083863 107 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 Gm22866-201ENSMUST00000083947 177 ntBASIC2.5□□□□□ -2.01
Smarca1Q6PGB8 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm23951-201ENSMUST00000104029 132 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Mir669i-201ENSMUST00000117007 127 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm14894-201ENSMUST00000117170 270 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm12926-201ENSMUST00000121158 409 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm14298-201ENSMUST00000139032 237 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm16356-201ENSMUST00000143300 169 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm28408-201ENSMUST00000191557 463 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm37449-201ENSMUST00000193016 270 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm18658-201ENSMUST00000195558 270 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm44482-201ENSMUST00000199232 103 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm44419-201ENSMUST00000203338 229 ntBASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Smarca1Q6PGB8 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm9059-201ENSMUST00000118319 183 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm20613-201ENSMUST00000175828 345 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Mir7226-201ENSMUST00000184953 60 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm28951-201ENSMUST00000190742 313 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm36891-201ENSMUST00000191995 655 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm19901-201ENSMUST00000192191 495 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm43250-201ENSMUST00000196536 273 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Mir497-201ENSMUST00000200557 84 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm44858-201ENSMUST00000207360 154 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Mir322-201ENSMUST00000083484 95 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Mir32-201ENSMUST00000083610 70 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm26175-201ENSMUST00000083794 131 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Smarca1Q6PGB8 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm25094-201ENSMUST00000103992 131 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm14748-201ENSMUST00000119819 411 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm24598-201ENSMUST00000122510 74 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm25321-201ENSMUST00000122558 102 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm23232-201ENSMUST00000157300 105 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm16326-201ENSMUST00000162843 414 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm28008-201ENSMUST00000184021 186 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm37377-201ENSMUST00000191733 304 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm37713-201ENSMUST00000191746 198 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Mir7661-201ENSMUST00000197023 61 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm25796-201ENSMUST00000082645 163 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm23345-201ENSMUST00000083817 150 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.47□□□□□ -2.01
Smarca1Q6PGB8 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm12647-201ENSMUST00000118977 265 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm13588-201ENSMUST00000120026 135 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm16510-201ENSMUST00000153501 249 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm24769-201ENSMUST00000158506 129 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm23548-201ENSMUST00000158963 106 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm27878-201ENSMUST00000184000 106 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Mir6997-201ENSMUST00000184313 71 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm29167-201ENSMUST00000190024 377 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm36946-201ENSMUST00000192706 435 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm26265-202ENSMUST00000196326 133 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm45386-201ENSMUST00000210194 218 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.46□□□□□ -2.02
Smarca1Q6PGB8 Gm23851-201ENSMUST00000083831 103 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 259.8 ms