Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Nup98Q6PFD9 Gm25578-201ENSMUST00000083406 104 ntBASIC0.37□□□□□ -2.35
Nup98Q6PFD9 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Nup98Q6PFD9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.37□□□□□ -2.35
Nup98Q6PFD9 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm24896-201ENSMUST00000122741 135 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm22633-201ENSMUST00000179834 107 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Mir6411-201ENSMUST00000183556 108 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm24615-201ENSMUST00000083268 113 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm22972-201ENSMUST00000083297 131 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Mir362-201ENSMUST00000093592 65 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm26147-201ENSMUST00000104479 114 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm23036-201ENSMUST00000157885 99 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 DQ267101-201ENSMUST00000082562 73 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm22620-201ENSMUST00000082700 133 ntBASIC0.36□□□□□ -2.35
Nup98Q6PFD9 Gm14937-201ENSMUST00000119709 208 ntBASIC0.35□□□□□ -2.35
Nup98Q6PFD9 Gm14884-201ENSMUST00000120456 196 ntBASIC0.35□□□□□ -2.35
Nup98Q6PFD9 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.35□□□□□ -2.35
Nup98Q6PFD9 Gm23331-201ENSMUST00000157423 108 ntBASIC0.35□□□□□ -2.35
Nup98Q6PFD9 Gm24903-201ENSMUST00000158131 126 ntBASIC0.35□□□□□ -2.35
Nup98Q6PFD9 Gm24713-201ENSMUST00000178850 107 ntBASIC0.35□□□□□ -2.35
Nup98Q6PFD9 Gm25448-201ENSMUST00000180065 107 ntBASIC0.35□□□□□ -2.35
Nup98Q6PFD9 Gm44429-201ENSMUST00000203542 186 ntBASIC0.35□□□□□ -2.35
Nup98Q6PFD9 Gm20102-201ENSMUST00000222445 220 ntBASIC0.35□□□□□ -2.35
Nup98Q6PFD9 Gm25110-201ENSMUST00000116684 121 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm25775-201ENSMUST00000116716 121 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm24795-201ENSMUST00000116737 121 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm25171-201ENSMUST00000116926 121 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm15010-201ENSMUST00000117153 407 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm25294-201ENSMUST00000122791 104 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm23829-201ENSMUST00000157392 270 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm26405-201ENSMUST00000158495 100 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Mir15a-201ENSMUST00000175266 84 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Mir6355-201ENSMUST00000183687 106 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm28666-201ENSMUST00000186649 274 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm37727-201ENSMUST00000191637 819 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm37319-201ENSMUST00000193500 636 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm45688-201ENSMUST00000210002 101 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Gm24536-201ENSMUST00000083144 107 ntBASIC0.34□□□□□ -2.35
Nup98Q6PFD9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 Gm14551-201ENSMUST00000120802 256 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 Gm14364-201ENSMUST00000129209 267 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 Gm17100-201ENSMUST00000168963 272 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 Gm24137-201ENSMUST00000180055 79 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 Gm22391-201ENSMUST00000180356 79 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 Gm43004-201ENSMUST00000201872 703 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 AC124569.1-201ENSMUST00000225932 101 ntBASIC0.34□□□□□ -2.36
Nup98Q6PFD9 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm24271-201ENSMUST00000102327 111 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm14624-201ENSMUST00000117746 192 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm12881-201ENSMUST00000121191 203 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm22796-201ENSMUST00000157234 106 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm26968-201ENSMUST00000182894 481 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm37399-201ENSMUST00000195224 416 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm43529-201ENSMUST00000199178 412 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm11351-202ENSMUST00000225724 478 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm24018-201ENSMUST00000083232 107 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm25138-201ENSMUST00000083248 136 ntBASIC0.33□□□□□ -2.36
Nup98Q6PFD9 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.32□□□□□ -2.36
Nup98Q6PFD9 Gm22759-201ENSMUST00000102276 96 ntBASIC0.32□□□□□ -2.36
Nup98Q6PFD9 AA413626-201ENSMUST00000121125 494 ntBASIC0.32□□□□□ -2.36
Nup98Q6PFD9 Gm14713-201ENSMUST00000122362 686 ntBASIC0.32□□□□□ -2.36
Nup98Q6PFD9 Gm23317-201ENSMUST00000157999 129 ntBASIC0.32□□□□□ -2.36
Nup98Q6PFD9 Gm26116-201ENSMUST00000175600 77 ntBASIC0.32□□□□□ -2.36
Nup98Q6PFD9 Gm25156-201ENSMUST00000179809 79 ntBASIC0.32□□□□□ -2.36
Nup98Q6PFD9 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.32□□□□□ -2.36
Nup98Q6PFD9 Gm18703-201ENSMUST00000215318 333 ntBASIC0.32□□□□□ -2.36
Nup98Q6PFD9 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.32□□□□□ -2.36
Nup98Q6PFD9 Gm22522-201ENSMUST00000158271 151 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm27717-201ENSMUST00000183933 151 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.31□□□□□ -2.36
Nup98Q6PFD9 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Nup98Q6PFD9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Mir710-201ENSMUST00000102088 110 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm6568-201ENSMUST00000122274 697 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm22038-201ENSMUST00000157277 242 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm23390-201ENSMUST00000157393 106 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm22076-201ENSMUST00000158601 84 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm2962-201ENSMUST00000159266 336 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms