Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm6444-201ENSMUST00000119611 458 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm24892-201ENSMUST00000122747 104 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm22159-201ENSMUST00000158412 130 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm23003-201ENSMUST00000179948 107 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm27878-201ENSMUST00000184000 106 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm29397-201ENSMUST00000185205 333 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm44858-201ENSMUST00000207360 154 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm23406-201ENSMUST00000082537 122 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm25788-201ENSMUST00000082721 131 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm26314-201ENSMUST00000083891 107 ntBASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Snrnp40Q6PE01 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
Snrnp40Q6PE01 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm14588-201ENSMUST00000119895 172 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm24598-201ENSMUST00000122510 74 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm24480-201ENSMUST00000157442 103 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm25368-201ENSMUST00000158847 131 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm3724-201ENSMUST00000197957 349 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm45207-201ENSMUST00000207469 145 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm8031-201ENSMUST00000213430 626 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.02□□□□□ -2.09
Snrnp40Q6PE01 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm23010-201ENSMUST00000104151 126 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm24907-201ENSMUST00000116932 128 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm13711-201ENSMUST00000119708 453 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm25115-201ENSMUST00000157187 140 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm25059-201ENSMUST00000157367 117 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm22316-201ENSMUST00000158012 216 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm22113-201ENSMUST00000158343 104 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm22114-201ENSMUST00000177756 107 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm28058-201ENSMUST00000186421 264 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm29490-201ENSMUST00000190923 342 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm44308-201ENSMUST00000197080 99 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm22685-201ENSMUST00000082848 106 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm24316-201ENSMUST00000083041 107 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Mir300-201ENSMUST00000083485 79 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.01□□□□□ -2.09
Snrnp40Q6PE01 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm14894-201ENSMUST00000117170 270 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm11935-201ENSMUST00000118608 399 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm25113-201ENSMUST00000157185 143 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm23262-201ENSMUST00000158323 168 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm24005-201ENSMUST00000158459 296 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm22947-201ENSMUST00000158559 91 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm26157-201ENSMUST00000158974 126 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Hmga1b-202ENSMUST00000178955 120 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm37338-201ENSMUST00000191986 127 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm37449-201ENSMUST00000193016 270 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm18658-201ENSMUST00000195558 270 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Mir7661-201ENSMUST00000197023 61 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm43676-201ENSMUST00000197532 540 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Mir3970-201ENSMUST00000199287 90 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm45522-201ENSMUST00000210784 166 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm25589-201ENSMUST00000082502 166 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm25636-201ENSMUST00000082666 133 ntBASIC2□□□□□ -2.09
Snrnp40Q6PE01 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm23941-201ENSMUST00000101953 107 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Snora36b-201ENSMUST00000104383 132 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm24010-201ENSMUST00000157731 282 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm24858-201ENSMUST00000158058 323 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm23579-201ENSMUST00000158528 103 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm20613-201ENSMUST00000175828 345 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm22263-201ENSMUST00000180060 104 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm44429-201ENSMUST00000203542 186 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm44960-201ENSMUST00000207403 141 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm25124-201ENSMUST00000083345 164 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm26175-201ENSMUST00000083794 131 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.99□□□□□ -2.09
Snrnp40Q6PE01 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 198.8 ms