Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Rnf220Q6PDX6 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Rnf220Q6PDX6 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
Rnf220Q6PDX6 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Gm23472-201ENSMUST00000101806 191 ntBASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Gm23536-201ENSMUST00000157541 134 ntBASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Gm23858-201ENSMUST00000158384 106 ntBASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Gm25711-201ENSMUST00000158633 128 ntBASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Gm26061-201ENSMUST00000175584 108 ntBASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Gm24497-201ENSMUST00000177868 191 ntBASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Gm23444-201ENSMUST00000082922 191 ntBASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.77□□□□□ -1.97
Rnf220Q6PDX6 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm24283-201ENSMUST00000104233 107 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm23836-201ENSMUST00000104434 129 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm12512-201ENSMUST00000119620 217 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm12721-201ENSMUST00000120621 268 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm28020-201ENSMUST00000157739 67 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm22535-201ENSMUST00000158174 119 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm27773-201ENSMUST00000184087 78 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm29602-201ENSMUST00000186887 442 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm37746-201ENSMUST00000193249 198 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm15235-201ENSMUST00000200572 194 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm44853-201ENSMUST00000209070 250 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Mir340-201ENSMUST00000083483 98 ntBASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Rnf220Q6PDX6 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm24121-201ENSMUST00000102029 106 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm26075-201ENSMUST00000104062 121 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm15986-201ENSMUST00000122153 400 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm22380-201ENSMUST00000157479 95 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm26088-201ENSMUST00000157896 131 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm27991-201ENSMUST00000184804 137 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm37007-201ENSMUST00000194234 319 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm44352-201ENSMUST00000196358 110 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Mir7215-201ENSMUST00000200383 51 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm44903-201ENSMUST00000206840 130 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm11351-202ENSMUST00000225724 478 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm9174-201ENSMUST00000078149 255 ntBASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Rnf220Q6PDX6 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm24867-201ENSMUST00000104161 107 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm24079-201ENSMUST00000104352 132 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm6897-201ENSMUST00000117714 138 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm14758-201ENSMUST00000119104 138 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm24440-201ENSMUST00000157236 63 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm24512-201ENSMUST00000174963 65 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm22979-201ENSMUST00000082609 159 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm26493-201ENSMUST00000083155 136 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Mir323-201ENSMUST00000083683 86 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Gm24817-201ENSMUST00000093672 105 ntBASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Rnf220Q6PDX6 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm26135-201ENSMUST00000101993 72 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm22486-201ENSMUST00000116815 137 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm15190-201ENSMUST00000120855 276 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm22221-201ENSMUST00000157362 103 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm23324-201ENSMUST00000157421 131 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm25835-201ENSMUST00000158917 144 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Snord50b-201ENSMUST00000178497 72 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm27783-201ENSMUST00000183534 105 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm27893-201ENSMUST00000184408 194 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm45508-201ENSMUST00000209298 299 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm10025-201ENSMUST00000079568 372 ntBASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.73□□□□□ -1.97
Rnf220Q6PDX6 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms