Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm23090-201ENSMUST00000177331 78 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm20257-202ENSMUST00000188643 130 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm18410-201ENSMUST00000207199 577 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 AC157017.2-201ENSMUST00000218354 777 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 AC164297.1-201ENSMUST00000224484 1561 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Mir669o-201ENSMUST00000103898 96 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm16400-201ENSMUST00000116523 1029 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm14566-201ENSMUST00000118915 321 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm4910-201ENSMUST00000119605 366 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm15807-201ENSMUST00000119880 1128 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm13396-201ENSMUST00000120617 271 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm24056-201ENSMUST00000158617 146 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm9156-201ENSMUST00000189660 463 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm37089-201ENSMUST00000195616 129 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm37102-201ENSMUST00000195740 1105 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Mir703-201ENSMUST00000197105 109 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Mir3961-201ENSMUST00000198795 59 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm44954-201ENSMUST00000208513 227 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm25578-201ENSMUST00000083406 104 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm12143-201ENSMUST00000119666 332 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm25968-201ENSMUST00000157167 100 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Mir3079-201ENSMUST00000175428 90 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm28995-201ENSMUST00000186625 261 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm42719-201ENSMUST00000197393 355 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm42516-201ENSMUST00000198691 767 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm45315-201ENSMUST00000209283 333 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC-0.07□□□□□ -2.42
Col7a1Q63870 AC125523.1-201ENSMUST00000228018 934 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
Col7a1Q63870 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm11065-201ENSMUST00000111462 228 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm14937-201ENSMUST00000119709 208 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm22611-201ENSMUST00000158288 150 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm23114-201ENSMUST00000158478 117 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm15508-201ENSMUST00000160330 325 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm20477-201ENSMUST00000174028 280 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm25020-201ENSMUST00000178071 107 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Mir6372-201ENSMUST00000185114 109 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm26265-202ENSMUST00000196326 133 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm44524-201ENSMUST00000203899 271 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC-0.08□□□□□ -2.42
Col7a1Q63870 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm24928-201ENSMUST00000083399 107 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 AC163660.3-201ENSMUST00000224253 1563 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm38388-201ENSMUST00000195569 1430 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm24833-201ENSMUST00000116775 120 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm14713-201ENSMUST00000122362 686 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm24896-201ENSMUST00000122741 135 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm25371-201ENSMUST00000158162 101 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm24002-201ENSMUST00000158456 104 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Mir5104-201ENSMUST00000175319 94 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Mir344d-3-201ENSMUST00000175458 80 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm22510-201ENSMUST00000179304 79 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm26336-201ENSMUST00000179449 79 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm26390-201ENSMUST00000179628 79 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm26914-201ENSMUST00000182262 223 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm45101-201ENSMUST00000208327 232 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm18160-201ENSMUST00000214279 827 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC-0.08□□□□□ -2.42
Col7a1Q63870 Gm25185-201ENSMUST00000157754 96 ntBASIC-0.09□□□□□ -2.42
Col7a1Q63870 Gm15914-201ENSMUST00000161922 309 ntBASIC-0.09□□□□□ -2.42
Col7a1Q63870 Gm28666-201ENSMUST00000186649 274 ntBASIC-0.09□□□□□ -2.42
Col7a1Q63870 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC-0.09□□□□□ -2.42
Col7a1Q63870 Gm35262-201ENSMUST00000215133 267 ntBASIC-0.09□□□□□ -2.42
Col7a1Q63870 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
Col7a1Q63870 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.09□□□□□ -2.42
Col7a1Q63870 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
Col7a1Q63870 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC-0.09□□□□□ -2.42
Col7a1Q63870 Gm37096-201ENSMUST00000192317 2058 ntBASIC-0.09□□□□□ -2.42
Col7a1Q63870 Gm13343-201ENSMUST00000116474 105 ntBASIC-0.09□□□□□ -2.42
Col7a1Q63870 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.09□□□□□ -2.42
Col7a1Q63870 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms