Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Six1Q62231 Gm22685-201ENSMUST00000082848 106 ntBASIC1.91□□□□□ -2.1
Six1Q62231 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Six1Q62231 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Six1Q62231 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
Six1Q62231 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.9□□□□□ -2.11
Six1Q62231 Gm26154-201ENSMUST00000102339 96 ntBASIC1.9□□□□□ -2.11
Six1Q62231 Gm13432-201ENSMUST00000118861 241 ntBASIC1.9□□□□□ -2.11
Six1Q62231 Gm13588-201ENSMUST00000120026 135 ntBASIC1.9□□□□□ -2.11
Six1Q62231 Gm22216-201ENSMUST00000157557 114 ntBASIC1.9□□□□□ -2.11
Six1Q62231 Gm25457-201ENSMUST00000179509 107 ntBASIC1.9□□□□□ -2.11
Six1Q62231 Mir8090-201ENSMUST00000185078 136 ntBASIC1.9□□□□□ -2.11
Six1Q62231 Gm44320-201ENSMUST00000199276 86 ntBASIC1.9□□□□□ -2.11
Six1Q62231 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.9□□□□□ -2.11
Six1Q62231 Gm45207-201ENSMUST00000207469 145 ntBASIC1.9□□□□□ -2.11
Six1Q62231 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Six1Q62231 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.9□□□□□ -2.11
Six1Q62231 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.9□□□□□ -2.11
Six1Q62231 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Six1Q62231 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
Six1Q62231 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Six1Q62231 Gm23951-201ENSMUST00000104029 132 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Six1Q62231 Gm5396-201ENSMUST00000121222 532 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Gm22945-201ENSMUST00000158557 157 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Gm24308-201ENSMUST00000177773 114 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Mir6406-201ENSMUST00000183592 120 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.89□□□□□ -2.11
Six1Q62231 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.89□□□□□ -2.11
Six1Q62231 Gm28408-201ENSMUST00000191557 463 ntBASIC1.89□□□□□ -2.11
Six1Q62231 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.89□□□□□ -2.11
Six1Q62231 Gm26265-201ENSMUST00000083277 135 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.89□□□□□ -2.11
Six1Q62231 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.89□□□□□ -2.11
Six1Q62231 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Six1Q62231 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Six1Q62231 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Six1Q62231 Gm11322-201ENSMUST00000118095 435 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm12926-201ENSMUST00000121158 409 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm2830-201ENSMUST00000140330 385 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm24783-201ENSMUST00000157639 100 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm22803-201ENSMUST00000158049 283 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm23921-201ENSMUST00000175258 107 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm24618-201ENSMUST00000177718 94 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm23953-201ENSMUST00000178214 94 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm26332-201ENSMUST00000179813 94 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm22863-201ENSMUST00000180265 94 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Six1Q62231 Mir6399-201ENSMUST00000184050 84 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm28257-201ENSMUST00000185244 463 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Six1Q62231 Gm28951-201ENSMUST00000190742 313 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm43914-201ENSMUST00000203592 594 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Gm44533-201ENSMUST00000207782 268 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.88□□□□□ -2.11
Six1Q62231 Gm2829-201ENSMUST00000213121 499 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.88□□□□□ -2.11
Six1Q62231 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.88□□□□□ -2.11
Six1Q62231 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.88□□□□□ -2.11
Six1Q62231 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Six1Q62231 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.87□□□□□ -2.11
Six1Q62231 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.87□□□□□ -2.11
Six1Q62231 Gm22678-201ENSMUST00000116974 101 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm14774-201ENSMUST00000117857 536 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm12837-201ENSMUST00000120131 373 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm14215-201ENSMUST00000120578 221 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm16355-201ENSMUST00000128606 231 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm22447-201ENSMUST00000158155 92 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm24348-201ENSMUST00000158710 130 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Mir5624-201ENSMUST00000176635 61 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Mir6379-201ENSMUST00000183392 115 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm37778-201ENSMUST00000191732 190 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm44429-201ENSMUST00000203542 186 ntBASIC1.87□□□□□ -2.11
Six1Q62231 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm23625-201ENSMUST00000082457 100 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm23246-201ENSMUST00000083371 67 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm23851-201ENSMUST00000083831 103 ntBASIC1.87□□□□□ -2.11
Six1Q62231 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Six1Q62231 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Six1Q62231 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Six1Q62231 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Six1Q62231 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Six1Q62231 Mdga2-203ENSMUST00000113942 423 ntBASIC1.86□□□□□ -2.11
Six1Q62231 Gm12647-201ENSMUST00000118977 265 ntBASIC1.86□□□□□ -2.11
Six1Q62231 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.86□□□□□ -2.11
Six1Q62231 Gm12924-201ENSMUST00000121747 318 ntBASIC1.86□□□□□ -2.11
Six1Q62231 Gm25051-201ENSMUST00000158602 249 ntBASIC1.86□□□□□ -2.11
Six1Q62231 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.86□□□□□ -2.11
Six1Q62231 Gm22800-201ENSMUST00000175627 94 ntBASIC1.86□□□□□ -2.11
Six1Q62231 Gm24799-201ENSMUST00000178431 79 ntBASIC1.86□□□□□ -2.11
Six1Q62231 Gm29512-201ENSMUST00000185544 315 ntBASIC1.86□□□□□ -2.11
Six1Q62231 Gm28110-201ENSMUST00000185782 315 ntBASIC1.86□□□□□ -2.11
Six1Q62231 Gm29057-201ENSMUST00000186468 315 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms