Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 Gm23987-201ENSMUST00000117039 129 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 Gm26255-201ENSMUST00000122492 103 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 Mir6399-201ENSMUST00000184050 84 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 Mir7225-201ENSMUST00000184178 54 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 Gm28717-201ENSMUST00000189950 315 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 Mir7021-201ENSMUST00000197026 63 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.11□□□□□ -2.07
Ctr9Q62018 Gm7214-201ENSMUST00000222428 272 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 Gm23246-201ENSMUST00000083371 67 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 Gm22723-201ENSMUST00000083820 129 ntBASIC2.11□□□□□ -2.07
Ctr9Q62018 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.11□□□□□ -2.07
Ctr9Q62018 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ctr9Q62018 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Ctr9Q62018 Gm26500-201ENSMUST00000101867 106 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ctr9Q62018 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm22678-201ENSMUST00000116974 101 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm14215-201ENSMUST00000120578 221 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm25961-201ENSMUST00000157174 135 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm22491-201ENSMUST00000157190 102 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm23120-201ENSMUST00000157654 287 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm23589-201ENSMUST00000157660 105 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm22843-201ENSMUST00000157710 134 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm25012-201ENSMUST00000158396 164 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm17100-201ENSMUST00000168963 272 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm22800-201ENSMUST00000175627 94 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm29657-201ENSMUST00000189807 342 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm37778-201ENSMUST00000191732 190 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Gm45754-201ENSMUST00000212380 279 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ctr9Q62018 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.1□□□□□ -2.07
Ctr9Q62018 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.1□□□□□ -2.07
Ctr9Q62018 Mir759-201ENSMUST00000103254 98 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm23011-201ENSMUST00000104148 132 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm25377-201ENSMUST00000104334 129 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm14624-201ENSMUST00000117746 192 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm13432-201ENSMUST00000118861 241 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm25543-201ENSMUST00000122678 312 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm22603-201ENSMUST00000157603 96 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm22316-201ENSMUST00000158012 216 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm25658-201ENSMUST00000158472 128 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm25956-201ENSMUST00000175115 217 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm24487-201ENSMUST00000178017 63 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm25671-201ENSMUST00000178612 105 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm23307-201ENSMUST00000179167 105 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm25286-201ENSMUST00000179790 105 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ctr9Q62018 Mir3569-201ENSMUST00000185080 58 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Gm43427-201ENSMUST00000198188 331 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Snord68-201ENSMUST00000082516 86 ntBASIC2.09□□□□□ -2.07
Ctr9Q62018 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ctr9Q62018 Gm22713-201ENSMUST00000116895 130 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Gm5396-201ENSMUST00000121222 532 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Gm23381-201ENSMUST00000157676 94 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Gm26400-201ENSMUST00000175012 85 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Mir8090-201ENSMUST00000185078 136 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Gm37162-201ENSMUST00000191708 551 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Gm44960-201ENSMUST00000207403 141 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Gm18991-201ENSMUST00000209225 746 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Gm2829-201ENSMUST00000213121 499 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ctr9Q62018 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.08□□□□□ -2.08
Ctr9Q62018 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Ctr9Q62018 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm25090-201ENSMUST00000104000 132 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm11859-201ENSMUST00000118099 455 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm11254-201ENSMUST00000122368 653 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm15365-201ENSMUST00000122392 300 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm25279-201ENSMUST00000122608 133 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm22113-201ENSMUST00000158343 104 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm21885-201ENSMUST00000178891 327 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Mir7215-201ENSMUST00000200383 51 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm19572-201ENSMUST00000214326 338 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Gm22685-201ENSMUST00000082848 106 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.07□□□□□ -2.08
Ctr9Q62018 Mir496a-201ENSMUST00000093627 79 ntBASIC2.07□□□□□ -2.08
Ctr9Q62018 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms