Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm10025-201ENSMUST00000079568 372 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 Gm23246-201ENSMUST00000083371 67 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Ift88Q61371 Gm23013-201ENSMUST00000104146 106 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Gm24670-201ENSMUST00000104154 132 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Gm24982-201ENSMUST00000104456 132 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Gm24475-201ENSMUST00000157435 143 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Gm24210-201ENSMUST00000158263 133 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Gm6801-201ENSMUST00000190697 339 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Gm37586-201ENSMUST00000193654 204 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Mir465d-201ENSMUST00000196314 58 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.68□□□□□ -1.98
Ift88Q61371 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Gm22358-201ENSMUST00000082877 122 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Gm25199-201ENSMUST00000083095 104 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Gm25188-201ENSMUST00000083913 122 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Gm25628-201ENSMUST00000084002 105 ntBASIC2.68□□□□□ -1.98
Ift88Q61371 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ift88Q61371 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.67□□□□□ -1.98
Ift88Q61371 Gm11786-201ENSMUST00000120799 155 ntBASIC2.67□□□□□ -1.98
Ift88Q61371 Gm23381-201ENSMUST00000157676 94 ntBASIC2.67□□□□□ -1.98
Ift88Q61371 Snora15-201ENSMUST00000177461 131 ntBASIC2.67□□□□□ -1.98
Ift88Q61371 Gm20144-201ENSMUST00000203031 165 ntBASIC2.67□□□□□ -1.98
Ift88Q61371 Gm43993-201ENSMUST00000203972 247 ntBASIC2.67□□□□□ -1.98
Ift88Q61371 Gm18991-201ENSMUST00000209225 746 ntBASIC2.67□□□□□ -1.98
Ift88Q61371 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.67□□□□□ -1.98
Ift88Q61371 Gm46389-201ENSMUST00000223199 392 ntBASIC2.67□□□□□ -1.98
Ift88Q61371 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.67□□□□□ -1.98
Ift88Q61371 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.67□□□□□ -1.98
Ift88Q61371 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Ift88Q61371 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ift88Q61371 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.67□□□□□ -1.98
Ift88Q61371 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Ift88Q61371 Mir466k-201ENSMUST00000116774 122 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm12897-201ENSMUST00000120341 250 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm13443-201ENSMUST00000120770 555 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm12926-201ENSMUST00000121158 409 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm23982-201ENSMUST00000157141 106 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm24480-201ENSMUST00000157442 103 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm25888-201ENSMUST00000157778 302 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm22118-201ENSMUST00000175593 171 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm23141-201ENSMUST00000178682 94 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Mir6336-201ENSMUST00000183581 130 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm29452-201ENSMUST00000187996 313 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.66□□□□□ -1.98
Ift88Q61371 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm24355-201ENSMUST00000082858 122 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm24522-201ENSMUST00000083964 108 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Ift88Q61371 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Ift88Q61371 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.66□□□□□ -1.98
Ift88Q61371 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.65□□□□□ -1.98
Ift88Q61371 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Ift88Q61371 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Ift88Q61371 Gm6574-201ENSMUST00000120037 362 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm25945-201ENSMUST00000122484 135 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm22321-201ENSMUST00000157152 104 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm27579-201ENSMUST00000158113 63 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm24771-201ENSMUST00000158508 137 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm22947-201ENSMUST00000158559 91 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm24573-201ENSMUST00000175499 112 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm25933-201ENSMUST00000178943 108 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Trbv18-201ENSMUST00000194256 294 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm37089-201ENSMUST00000195616 129 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm43676-201ENSMUST00000197532 540 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.65□□□□□ -1.99
Ift88Q61371 Gm45522-201ENSMUST00000210784 166 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm5899-201ENSMUST00000071770 270 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Gm26126-201ENSMUST00000083188 164 ntBASIC2.65□□□□□ -1.99
Ift88Q61371 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Ift88Q61371 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Ift88Q61371 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Ift88Q61371 Mir682-201ENSMUST00000102281 96 ntBASIC2.64□□□□□ -1.99
Ift88Q61371 Gm13885-201ENSMUST00000117569 187 ntBASIC2.64□□□□□ -1.99
Ift88Q61371 Gm13913-201ENSMUST00000121126 260 ntBASIC2.64□□□□□ -1.99
Ift88Q61371 Gm23668-201ENSMUST00000157465 111 ntBASIC2.64□□□□□ -1.99
Ift88Q61371 Gm23535-201ENSMUST00000157542 106 ntBASIC2.64□□□□□ -1.99
Ift88Q61371 Gm23642-201ENSMUST00000157858 258 ntBASIC2.64□□□□□ -1.99
Ift88Q61371 Gm26287-201ENSMUST00000158887 81 ntBASIC2.64□□□□□ -1.99
Ift88Q61371 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.64□□□□□ -1.99
Ift88Q61371 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.64□□□□□ -1.99
Ift88Q61371 Gm24163-201ENSMUST00000093660 132 ntBASIC2.64□□□□□ -1.99
Ift88Q61371 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Ift88Q61371 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Ift88Q61371 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.63□□□□□ -1.99
Ift88Q61371 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.63□□□□□ -1.99
Ift88Q61371 Gm24423-201ENSMUST00000101982 106 ntBASIC2.63□□□□□ -1.99
Ift88Q61371 Gm14652-201ENSMUST00000118479 235 ntBASIC2.63□□□□□ -1.99
Ift88Q61371 Gm25664-201ENSMUST00000157697 107 ntBASIC2.63□□□□□ -1.99
Ift88Q61371 Gm22483-201ENSMUST00000157986 274 ntBASIC2.63□□□□□ -1.99
Ift88Q61371 Gm25333-201ENSMUST00000158035 246 ntBASIC2.63□□□□□ -1.99
Ift88Q61371 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms