Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm24172-201ENSMUST00000104127 117 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Mir466h-201ENSMUST00000104748 81 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Gm24846-201ENSMUST00000158033 108 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Gm25162-201ENSMUST00000158906 159 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Gm25749-201ENSMUST00000175485 111 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Mir6370-201ENSMUST00000183510 120 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Gm27803-201ENSMUST00000183763 119 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Gm28921-201ENSMUST00000190219 378 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Gm43583-201ENSMUST00000199235 303 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Gm43264-201ENSMUST00000202284 325 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CtcfQ61164 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
CtcfQ61164 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.71□□□□□ -1.98
CtcfQ61164 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CtcfQ61164 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CtcfQ61164 Gm23599-201ENSMUST00000157261 251 ntBASIC2.7□□□□□ -1.98
CtcfQ61164 Gm24291-201ENSMUST00000157633 162 ntBASIC2.7□□□□□ -1.98
CtcfQ61164 Gm23474-201ENSMUST00000158884 75 ntBASIC2.7□□□□□ -1.98
CtcfQ61164 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CtcfQ61164 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.7□□□□□ -1.98
CtcfQ61164 Gm23268-201ENSMUST00000175494 78 ntBASIC2.7□□□□□ -1.98
CtcfQ61164 Gm20660-201ENSMUST00000177515 289 ntBASIC2.7□□□□□ -1.98
CtcfQ61164 Mir6336-201ENSMUST00000183581 130 ntBASIC2.7□□□□□ -1.98
CtcfQ61164 Gm27761-201ENSMUST00000184091 131 ntBASIC2.7□□□□□ -1.98
CtcfQ61164 Gm5329-201ENSMUST00000186898 463 ntBASIC2.7□□□□□ -1.98
CtcfQ61164 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.7□□□□□ -1.98
CtcfQ61164 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.7□□□□□ -1.98
CtcfQ61164 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CtcfQ61164 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
CtcfQ61164 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CtcfQ61164 Mir881-201ENSMUST00000104844 78 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm15002-201ENSMUST00000118406 452 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm11572-201ENSMUST00000119164 120 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm2830-201ENSMUST00000140330 385 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm23641-201ENSMUST00000157857 101 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm23476-201ENSMUST00000158881 274 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm24084-201ENSMUST00000175173 137 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm23355-201ENSMUST00000177614 107 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm23148-201ENSMUST00000180367 107 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm43722-201ENSMUST00000196054 124 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CtcfQ61164 Gm6615-201ENSMUST00000199426 631 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm44459-201ENSMUST00000203926 160 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.69□□□□□ -1.98
CtcfQ61164 Gm8031-201ENSMUST00000213430 626 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.69□□□□□ -1.98
CtcfQ61164 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.69□□□□□ -1.98
CtcfQ61164 Gm19118-201ENSMUST00000222554 98 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm10298-201ENSMUST00000074801 265 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm25258-201ENSMUST00000083049 107 ntBASIC2.69□□□□□ -1.98
CtcfQ61164 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm22149-201ENSMUST00000104442 136 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm13714-201ENSMUST00000117313 221 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm6954-201ENSMUST00000117416 225 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm25270-201ENSMUST00000122606 138 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm24210-201ENSMUST00000158263 133 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm22433-201ENSMUST00000158550 142 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm17100-201ENSMUST00000168963 272 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Mir5118-201ENSMUST00000175551 67 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CtcfQ61164 Gm37162-201ENSMUST00000191708 551 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm44526-201ENSMUST00000204664 121 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm44977-201ENSMUST00000205283 420 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm45522-201ENSMUST00000210784 166 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm10025-201ENSMUST00000079568 372 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Snord14d-201ENSMUST00000083424 86 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Gm26327-201ENSMUST00000093724 111 ntBASIC2.68□□□□□ -1.98
CtcfQ61164 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.68□□□□□ -1.98
CtcfQ61164 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CtcfQ61164 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 Gm22752-201ENSMUST00000102083 109 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 Gm22151-201ENSMUST00000116963 58 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 Gm22654-201ENSMUST00000157874 105 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 Snord11-201ENSMUST00000158468 84 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 Gm20718-201ENSMUST00000176058 259 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 Gm25450-201ENSMUST00000179144 107 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 Gm28169-201ENSMUST00000190342 345 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 Gm37713-201ENSMUST00000191746 198 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 Gm37807-201ENSMUST00000194310 190 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.67□□□□□ -1.98
CtcfQ61164 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.67□□□□□ -1.98
CtcfQ61164 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.67□□□□□ -1.98
CtcfQ61164 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CtcfQ61164 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.67□□□□□ -1.98
CtcfQ61164 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.67□□□□□ -1.98
CtcfQ61164 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CtcfQ61164 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CtcfQ61164 Gm23586-201ENSMUST00000157657 123 ntBASIC2.66□□□□□ -1.98
CtcfQ61164 Gm24997-201ENSMUST00000157910 105 ntBASIC2.66□□□□□ -1.98
CtcfQ61164 Gm23196-201ENSMUST00000158806 107 ntBASIC2.66□□□□□ -1.98
CtcfQ61164 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.66□□□□□ -1.98
CtcfQ61164 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.66□□□□□ -1.98
CtcfQ61164 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.66□□□□□ -1.98
CtcfQ61164 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.66□□□□□ -1.98
CtcfQ61164 Gm25078-201ENSMUST00000082530 107 ntBASIC2.66□□□□□ -1.98
CtcfQ61164 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms