Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.52□□□□□ -2.17
Usf1Q61069 Mir320-201ENSMUST00000083594 82 ntBASIC1.52□□□□□ -2.17
Usf1Q61069 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.52□□□□□ -2.17
Usf1Q61069 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Usf1Q61069 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Usf1Q61069 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 Gm22673-201ENSMUST00000104415 131 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 Mir3096-201ENSMUST00000116685 71 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 Gm13475-201ENSMUST00000119290 234 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Usf1Q61069 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.51□□□□□ -2.17
Usf1Q61069 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Usf1Q61069 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Usf1Q61069 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.51□□□□□ -2.17
Usf1Q61069 Gm28383-201ENSMUST00000187563 139 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 Gm29262-201ENSMUST00000190084 196 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 Gm37128-201ENSMUST00000192599 232 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 Mir6962-201ENSMUST00000199512 63 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.51□□□□□ -2.17
Usf1Q61069 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Usf1Q61069 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.51□□□□□ -2.17
Usf1Q61069 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Usf1Q61069 Gm15443-201ENSMUST00000118947 820 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Gm23172-201ENSMUST00000157160 124 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Mir6240-201ENSMUST00000184281 117 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Mir1291-201ENSMUST00000199842 117 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Usf1Q61069 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.5□□□□□ -2.17
Usf1Q61069 Gm44655-201ENSMUST00000207768 423 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Gm45754-201ENSMUST00000212380 279 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.5□□□□□ -2.17
Usf1Q61069 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 AC110380.1-201ENSMUST00000226987 389 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Usf1Q61069 Gm23614-201ENSMUST00000082598 107 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Gm24977-201ENSMUST00000083106 163 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Snora34-201ENSMUST00000083402 138 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.5□□□□□ -2.17
Usf1Q61069 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Usf1Q61069 Gm26249-201ENSMUST00000116708 118 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.49□□□□□ -2.17
Usf1Q61069 Gm26181-201ENSMUST00000157687 106 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm23181-201ENSMUST00000158685 110 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm25486-201ENSMUST00000158726 63 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm16038-201ENSMUST00000159317 193 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm25958-201ENSMUST00000175114 71 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Snord87-201ENSMUST00000175437 87 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm27544-201ENSMUST00000185069 155 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm29005-201ENSMUST00000186773 320 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm28200-201ENSMUST00000187778 315 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm29378-201ENSMUST00000188723 315 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm28909-201ENSMUST00000189406 315 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Usf1Q61069 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC1.49□□□□□ -2.17
Usf1Q61069 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.49□□□□□ -2.17
Usf1Q61069 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.49□□□□□ -2.17
Usf1Q61069 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm24037-201ENSMUST00000082871 180 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm22972-201ENSMUST00000083297 131 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm10360-201ENSMUST00000097219 272 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.49□□□□□ -2.17
Usf1Q61069 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm25543-201ENSMUST00000122678 312 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm27926-201ENSMUST00000157180 66 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm22217-201ENSMUST00000157556 313 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm24005-201ENSMUST00000158459 296 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm20438-201ENSMUST00000174441 329 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm25069-201ENSMUST00000175238 86 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm24656-201ENSMUST00000177548 132 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm28848-201ENSMUST00000189984 168 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm18546-201ENSMUST00000197245 676 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm45878-201ENSMUST00000211839 241 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm25579-201ENSMUST00000083407 106 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm26314-201ENSMUST00000083891 107 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Gm3867-201ENSMUST00000086108 279 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.48□□□□□ -2.17
Usf1Q61069 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Usf1Q61069 Gm25773-201ENSMUST00000116718 127 ntBASIC1.47□□□□□ -2.17
Usf1Q61069 Gm22193-201ENSMUST00000116868 76 ntBASIC1.47□□□□□ -2.17
Usf1Q61069 Gm12351-201ENSMUST00000118727 292 ntBASIC1.47□□□□□ -2.17
Usf1Q61069 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.47□□□□□ -2.17
Usf1Q61069 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.47□□□□□ -2.17
Usf1Q61069 Gm16162-201ENSMUST00000162296 297 ntBASIC1.47□□□□□ -2.17
Usf1Q61069 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.47□□□□□ -2.17
Usf1Q61069 Gm32175-201ENSMUST00000193641 346 ntBASIC1.47□□□□□ -2.17
Usf1Q61069 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.47□□□□□ -2.17
Usf1Q61069 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Usf1Q61069 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.47□□□□□ -2.17
Usf1Q61069 Gm25801-201ENSMUST00000082638 106 ntBASIC1.47□□□□□ -2.17
Usf1Q61069 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms