Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm13432-201ENSMUST00000118861 241 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm24053-201ENSMUST00000158620 105 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm25996-201ENSMUST00000175393 117 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm24308-201ENSMUST00000177773 114 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm27640-201ENSMUST00000184580 147 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Mir6376-201ENSMUST00000185149 131 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm37449-201ENSMUST00000193016 270 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm18658-201ENSMUST00000195558 270 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm43583-201ENSMUST00000199235 303 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm44533-201ENSMUST00000207782 268 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Vps54Q5SPW0 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
Vps54Q5SPW0 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm23109-201ENSMUST00000116867 126 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm11935-201ENSMUST00000118608 399 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm24480-201ENSMUST00000157442 103 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm22803-201ENSMUST00000158049 283 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Mir669n-201ENSMUST00000158636 54 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Mir7026-201ENSMUST00000184384 67 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm28288-201ENSMUST00000191019 214 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm44468-201ENSMUST00000199516 105 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm44419-201ENSMUST00000203338 229 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm45207-201ENSMUST00000207469 145 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm44564-201ENSMUST00000207985 180 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.3□□□□□ -2.04
Vps54Q5SPW0 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm25589-201ENSMUST00000082502 166 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.3□□□□□ -2.04
Vps54Q5SPW0 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.29□□□□□ -2.04
Vps54Q5SPW0 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.29□□□□□ -2.04
Vps54Q5SPW0 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Vps54Q5SPW0 Gm25711-201ENSMUST00000158633 128 ntBASIC2.29□□□□□ -2.04
Vps54Q5SPW0 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Vps54Q5SPW0 Gm37338-201ENSMUST00000191986 127 ntBASIC2.29□□□□□ -2.04
Vps54Q5SPW0 Gm44666-201ENSMUST00000208544 391 ntBASIC2.29□□□□□ -2.04
Vps54Q5SPW0 Gm6109-201ENSMUST00000223297 348 ntBASIC2.29□□□□□ -2.04
Vps54Q5SPW0 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Vps54Q5SPW0 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Vps54Q5SPW0 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Vps54Q5SPW0 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm26249-201ENSMUST00000116708 118 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm14803-201ENSMUST00000117163 361 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm22598-201ENSMUST00000157600 127 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm22447-201ENSMUST00000158155 92 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm24799-201ENSMUST00000178431 79 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Mir6406-201ENSMUST00000183592 120 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm28008-201ENSMUST00000184021 186 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Vps54Q5SPW0 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.28□□□□□ -2.04
Vps54Q5SPW0 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm26329-201ENSMUST00000093723 110 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Vps54Q5SPW0 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Gm6829-201ENSMUST00000119858 360 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Gm23262-201ENSMUST00000158323 168 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Gm23921-201ENSMUST00000175258 107 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Gm20613-201ENSMUST00000175828 345 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Gm19777-201ENSMUST00000191940 358 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Gm42807-201ENSMUST00000200141 329 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Gm44938-201ENSMUST00000208614 427 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Gm25124-201ENSMUST00000083345 164 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Mir32-201ENSMUST00000083610 70 ntBASIC2.27□□□□□ -2.05
Vps54Q5SPW0 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Gm22750-201ENSMUST00000102076 103 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Mir758-201ENSMUST00000103260 81 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Gm12351-201ENSMUST00000118727 292 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Gm24858-201ENSMUST00000158058 323 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Gm28579-201ENSMUST00000186143 369 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Gm28408-201ENSMUST00000191557 463 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Mir7661-201ENSMUST00000197023 61 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.26□□□□□ -2.05
Vps54Q5SPW0 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Vps54Q5SPW0 Gm9059-201ENSMUST00000118319 183 ntBASIC2.25□□□□□ -2.05
Vps54Q5SPW0 Gm12235-201ENSMUST00000118596 170 ntBASIC2.25□□□□□ -2.05
Vps54Q5SPW0 Gm24896-201ENSMUST00000122741 135 ntBASIC2.25□□□□□ -2.05
Vps54Q5SPW0 Gm23043-201ENSMUST00000157890 109 ntBASIC2.25□□□□□ -2.05
Vps54Q5SPW0 Gm17161-201ENSMUST00000169187 524 ntBASIC2.25□□□□□ -2.05
Vps54Q5SPW0 Gm27544-201ENSMUST00000185069 155 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms