Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm28666-201ENSMUST00000186649 274 ntBASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm37757-201ENSMUST00000193072 210 ntBASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm43894-201ENSMUST00000203274 688 ntBASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm19032-201ENSMUST00000208584 592 ntBASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm23104-201ENSMUST00000083722 104 ntBASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm23951-201ENSMUST00000104029 132 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm14417-201ENSMUST00000120036 1074 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm11334-201ENSMUST00000121969 156 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 n-R5s18-201ENSMUST00000122740 121 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Scarna8-201ENSMUST00000158333 131 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm22668-201ENSMUST00000158716 260 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm26435-201ENSMUST00000179026 107 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm25361-201ENSMUST00000179358 76 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm27326-201ENSMUST00000183504 95 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm20144-201ENSMUST00000203031 165 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Snord95-201ENSMUST00000082846 68 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm23453-201ENSMUST00000083326 106 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm24261-201ENSMUST00000083744 104 ntBASIC-0.06□□□□□ -2.42
Trav3-1Q5R1I8 Gm25088-201ENSMUST00000101803 79 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Gm12106-201ENSMUST00000116006 1200 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Gm25981-201ENSMUST00000157921 295 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Gm23068-201ENSMUST00000158239 293 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Gm23761-201ENSMUST00000158347 104 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Gm22076-201ENSMUST00000158601 84 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Mir7059-201ENSMUST00000184825 59 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Gm44921-201ENSMUST00000205290 301 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 AC164612.2-202ENSMUST00000216314 253 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 AC167229.1-201ENSMUST00000220057 469 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 CT954323.1-201ENSMUST00000222774 229 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Gm22810-201ENSMUST00000082741 158 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Mir10a-201ENSMUST00000083585 110 ntBASIC-0.07□□□□□ -2.42
Trav3-1Q5R1I8 Mup-ps14-201ENSMUST00000118437 532 ntBASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 Mup-ps2-201ENSMUST00000142602 533 ntBASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 Gm23267-201ENSMUST00000178490 132 ntBASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 Gm25873-201ENSMUST00000180317 107 ntBASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 Gm28299-201ENSMUST00000189908 339 ntBASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 AC109212.1-201ENSMUST00000215561 427 ntBASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 Gm45815-201ENSMUST00000220241 146 ntBASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 AC133517.1-203ENSMUST00000225570 390 ntBASIC-0.08□□□□□ -2.42
Trav3-1Q5R1I8 Gm22469-201ENSMUST00000104118 133 ntBASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 Gm12433-201ENSMUST00000119659 255 ntBASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 Gm6568-201ENSMUST00000122274 697 ntBASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 Gm25968-201ENSMUST00000157167 100 ntBASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 Gm24510-201ENSMUST00000174965 94 ntBASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 Gm25120-201ENSMUST00000180148 79 ntBASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 Gm44137-201ENSMUST00000203670 367 ntBASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 AC124542.1-201ENSMUST00000205588 908 ntBASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 AC134335.1-201ENSMUST00000227626 329 ntBASIC-0.09□□□□□ -2.42
Trav3-1Q5R1I8 Gm26249-201ENSMUST00000116708 118 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Gm12016-201ENSMUST00000119079 681 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Gm22817-201ENSMUST00000157448 356 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Gm20543-201ENSMUST00000174200 726 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Gm24464-201ENSMUST00000179697 107 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Mir703-201ENSMUST00000197105 109 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Gm44488-201ENSMUST00000199467 119 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Gm44011-201ENSMUST00000203336 394 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Gm5899-201ENSMUST00000071770 270 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Gm25636-201ENSMUST00000082666 133 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Mir411-201ENSMUST00000083543 82 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Mir324-201ENSMUST00000083600 89 ntBASIC-0.1□□□□□ -2.43
Trav3-1Q5R1I8 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Gm6272-201ENSMUST00000121256 171 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 n-R5s188-201ENSMUST00000122646 105 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Gm25413-201ENSMUST00000158544 312 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Gm25643-201ENSMUST00000158874 103 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Gm26285-201ENSMUST00000177923 107 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Mir7028-201ENSMUST00000185016 64 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Gm21673-201ENSMUST00000186640 436 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Gm21135-201ENSMUST00000189023 436 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Gm37709-201ENSMUST00000195074 600 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 CT010454.1-201ENSMUST00000225975 265 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Gm23622-201ENSMUST00000082460 107 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Gm24038-201ENSMUST00000082872 159 ntBASIC-0.11□□□□□ -2.43
Trav3-1Q5R1I8 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm22545-201ENSMUST00000104350 132 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm14898-201ENSMUST00000120202 645 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm2020-201ENSMUST00000145242 579 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm25162-201ENSMUST00000158906 159 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm25750-201ENSMUST00000175483 112 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms