Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm24262-201ENSMUST00000157431 144 ntBASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 Gm22631-201ENSMUST00000179656 94 ntBASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 Gm23144-201ENSMUST00000180226 107 ntBASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 Gm27385-201ENSMUST00000184747 104 ntBASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 Gm28648-201ENSMUST00000190092 343 ntBASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 Gm45207-201ENSMUST00000207469 145 ntBASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.97□□□□□ -2.25
Col27a1Q5QNQ9 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm23983-201ENSMUST00000157142 114 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm23317-201ENSMUST00000157999 129 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm22328-201ENSMUST00000158074 112 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Mir3086-201ENSMUST00000175072 87 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm22800-201ENSMUST00000175627 94 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm24418-201ENSMUST00000177597 79 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm24639-201ENSMUST00000178518 79 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm23076-201ENSMUST00000179082 79 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm25077-201ENSMUST00000179157 79 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm27878-201ENSMUST00000184000 106 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm27419-201ENSMUST00000184576 109 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Mir195b-201ENSMUST00000184814 97 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm18775-201ENSMUST00000190763 586 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm24977-201ENSMUST00000083106 163 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Mir223-201ENSMUST00000102112 110 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm24865-201ENSMUST00000103246 96 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm24172-201ENSMUST00000104127 117 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm25035-201ENSMUST00000175414 77 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm24315-201ENSMUST00000177835 127 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm26501-201ENSMUST00000178307 107 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm42509-201ENSMUST00000197390 781 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 AC132954.1-201ENSMUST00000221017 342 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm24623-201ENSMUST00000082616 194 ntBASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Col27a1Q5QNQ9 Gm23321-201ENSMUST00000104465 126 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm11358-201ENSMUST00000122310 373 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm7953-201ENSMUST00000168278 469 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm11392-201ENSMUST00000181419 710 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm29005-201ENSMUST00000186773 320 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm20118-201ENSMUST00000187207 162 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm42925-201ENSMUST00000197359 285 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Gm26263-201ENSMUST00000083281 164 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Snord38a-201ENSMUST00000083746 71 ntBASIC0.95□□□□□ -2.26
Col27a1Q5QNQ9 Mir374b-201ENSMUST00000102314 95 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm14355-201ENSMUST00000117352 264 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm12053-201ENSMUST00000119022 252 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm24481-201ENSMUST00000157210 102 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm24915-201ENSMUST00000157288 78 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm22217-201ENSMUST00000157556 313 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm22082-201ENSMUST00000157587 161 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm24726-201ENSMUST00000158232 121 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm22075-201ENSMUST00000158599 192 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm24837-201ENSMUST00000158683 81 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm23725-201ENSMUST00000177876 107 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm26435-201ENSMUST00000179026 107 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm24862-201ENSMUST00000179103 79 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm23310-201ENSMUST00000179105 79 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm25461-201ENSMUST00000179293 79 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm29397-201ENSMUST00000185205 333 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm26384-201ENSMUST00000102183 110 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm11389-201ENSMUST00000121407 430 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm7925-201ENSMUST00000166690 401 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm28926-201ENSMUST00000191063 680 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm37599-201ENSMUST00000193067 489 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm43583-201ENSMUST00000199235 303 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms