Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm33654-201ENSMUST00000221704 215 ntBASIC1.62□□□□□ -2.15
Usp28Q5I043 Gm21937-201ENSMUST00000222825 218 ntBASIC1.62□□□□□ -2.15
Usp28Q5I043 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.62□□□□□ -2.15
Usp28Q5I043 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.62□□□□□ -2.15
Usp28Q5I043 Gm23731-201ENSMUST00000083749 107 ntBASIC1.62□□□□□ -2.15
Usp28Q5I043 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Usp28Q5I043 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm25543-201ENSMUST00000122678 312 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm25059-201ENSMUST00000157367 117 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm25982-201ENSMUST00000157920 101 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm25434-201ENSMUST00000158278 167 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm24005-201ENSMUST00000158459 296 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm24222-201ENSMUST00000158834 93 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm26159-201ENSMUST00000158968 104 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm26157-201ENSMUST00000158974 126 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Mir28b-201ENSMUST00000175399 80 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm20613-201ENSMUST00000175828 345 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm25121-201ENSMUST00000179846 79 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm27265-201ENSMUST00000183559 77 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Mir6406-201ENSMUST00000183592 120 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Mir7050-201ENSMUST00000184636 60 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm29397-201ENSMUST00000185205 333 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm43583-201ENSMUST00000199235 303 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm43472-201ENSMUST00000200175 154 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Usp28Q5I043 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm16976-205ENSMUST00000227324 226 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm25589-201ENSMUST00000082502 166 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm25788-201ENSMUST00000082721 131 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm23721-201ENSMUST00000083005 107 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm23242-201ENSMUST00000083055 107 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm25578-201ENSMUST00000083406 104 ntBASIC1.61□□□□□ -2.15
Usp28Q5I043 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Usp28Q5I043 Gm26249-201ENSMUST00000116708 118 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm14574-201ENSMUST00000120644 279 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm25827-201ENSMUST00000157089 107 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm24480-201ENSMUST00000157442 103 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm16038-201ENSMUST00000159317 193 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm27878-201ENSMUST00000184000 106 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.6□□□□□ -2.15
Usp28Q5I043 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm43624-201ENSMUST00000197368 180 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm44482-201ENSMUST00000199232 103 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm44666-201ENSMUST00000208544 391 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.6□□□□□ -2.15
Usp28Q5I043 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm11798-201ENSMUST00000119150 421 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm14906-201ENSMUST00000119265 390 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm23718-201ENSMUST00000157350 307 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm24837-201ENSMUST00000158683 81 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Usp28Q5I043 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm26864-201ENSMUST00000181346 156 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm32175-201ENSMUST00000193641 346 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm44564-201ENSMUST00000207985 180 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm34783-201ENSMUST00000209159 303 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm45296-201ENSMUST00000209625 205 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm45654-201ENSMUST00000210980 123 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm23404-201ENSMUST00000082543 97 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm22365-201ENSMUST00000093750 117 ntBASIC1.59□□□□□ -2.15
Usp28Q5I043 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.59□□□□□ -2.15
Usp28Q5I043 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Usp28Q5I043 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Usp28Q5I043 Gm11420-201ENSMUST00000120047 402 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Gm11786-201ENSMUST00000120799 155 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Gm25115-201ENSMUST00000157187 140 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Gm24504-201ENSMUST00000157679 100 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Gm24177-201ENSMUST00000158927 131 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Gm24487-201ENSMUST00000178017 63 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Mir6346-201ENSMUST00000183982 81 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Mir7241-201ENSMUST00000184532 64 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Gm29229-201ENSMUST00000188874 323 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Usp28Q5I043 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Mir29c-201ENSMUST00000083614 88 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Mir107-201ENSMUST00000083660 87 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.58□□□□□ -2.16
Usp28Q5I043 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms