Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm25115-201ENSMUST00000157187 140 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Gm25283-201ENSMUST00000157272 77 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Gm22403-201ENSMUST00000174919 84 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Gm45119-201ENSMUST00000207612 199 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 AC162387.1-201ENSMUST00000213369 213 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Gm25650-201ENSMUST00000083784 162 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Gm23335-201ENSMUST00000117021 90 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Gm13080-201ENSMUST00000120556 420 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Gm23838-201ENSMUST00000158067 162 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 AC123062.1-201ENSMUST00000221287 481 ntBASIC-0.61□□□□□ -2.51
Ccdc88bQ4QRL3 Gm13804-201ENSMUST00000119552 172 ntBASIC-0.62□□□□□ -2.51
Ccdc88bQ4QRL3 Gm14846-201ENSMUST00000121868 216 ntBASIC-0.62□□□□□ -2.51
Ccdc88bQ4QRL3 Gm8114-201ENSMUST00000172225 484 ntBASIC-0.62□□□□□ -2.51
Ccdc88bQ4QRL3 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC-0.62□□□□□ -2.51
Ccdc88bQ4QRL3 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC-0.62□□□□□ -2.51
Ccdc88bQ4QRL3 Gm18774-201ENSMUST00000218269 601 ntBASIC-0.62□□□□□ -2.51
Ccdc88bQ4QRL3 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
Ccdc88bQ4QRL3 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC-0.62□□□□□ -2.51
Ccdc88bQ4QRL3 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC-0.62□□□□□ -2.51
Ccdc88bQ4QRL3 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.62□□□□□ -2.51
Ccdc88bQ4QRL3 Gm15223-201ENSMUST00000120989 826 ntBASIC-0.63□□□□□ -2.51
Ccdc88bQ4QRL3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC-0.63□□□□□ -2.51
Ccdc88bQ4QRL3 Mir5104-201ENSMUST00000175319 94 ntBASIC-0.63□□□□□ -2.51
Ccdc88bQ4QRL3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC-0.63□□□□□ -2.51
Ccdc88bQ4QRL3 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.63□□□□□ -2.51
Ccdc88bQ4QRL3 Gm18410-201ENSMUST00000207199 577 ntBASIC-0.63□□□□□ -2.51
Ccdc88bQ4QRL3 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 Gm13603-201ENSMUST00000119404 83 ntBASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 Gm23854-201ENSMUST00000158378 108 ntBASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 Mir703-201ENSMUST00000197105 109 ntBASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 AC173482.5-201ENSMUST00000224181 327 ntBASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
Ccdc88bQ4QRL3 Gm25097-201ENSMUST00000104042 145 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28110-201ENSMUST00000185782 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm29057-201ENSMUST00000186468 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28737-201ENSMUST00000186808 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm29147-201ENSMUST00000186846 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm29118-201ENSMUST00000186908 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28433-201ENSMUST00000187085 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm29227-201ENSMUST00000187139 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28759-201ENSMUST00000187621 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28831-201ENSMUST00000187739 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm29034-201ENSMUST00000188099 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28752-201ENSMUST00000188340 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28474-201ENSMUST00000188501 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28569-201ENSMUST00000188748 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28120-201ENSMUST00000188812 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28369-201ENSMUST00000188993 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28537-201ENSMUST00000189026 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28861-201ENSMUST00000189681 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28717-201ENSMUST00000189950 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm29180-201ENSMUST00000190003 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm29631-201ENSMUST00000191065 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm28160-201ENSMUST00000191229 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm29469-201ENSMUST00000191448 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm37658-201ENSMUST00000192672 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm37129-201ENSMUST00000195791 315 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm43602-201ENSMUST00000196772 300 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm5955-201ENSMUST00000222712 219 ntBASIC-0.65□□□□□ -2.51
Ccdc88bQ4QRL3 Gm16412-201ENSMUST00000121602 273 ntBASIC-0.66□□□□□ -2.51
Ccdc88bQ4QRL3 Gm25557-201ENSMUST00000158084 315 ntBASIC-0.66□□□□□ -2.51
Ccdc88bQ4QRL3 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.66□□□□□ -2.51
Ccdc88bQ4QRL3 Mir6374-201ENSMUST00000184003 107 ntBASIC-0.66□□□□□ -2.51
Ccdc88bQ4QRL3 Gm29661-201ENSMUST00000186781 315 ntBASIC-0.66□□□□□ -2.51
Ccdc88bQ4QRL3 Gm19891-201ENSMUST00000189771 303 ntBASIC-0.66□□□□□ -2.51
Ccdc88bQ4QRL3 Gm43583-201ENSMUST00000199235 303 ntBASIC-0.66□□□□□ -2.51
Ccdc88bQ4QRL3 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC-0.66□□□□□ -2.51
Ccdc88bQ4QRL3 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.51
Ccdc88bQ4QRL3 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC-0.66□□□□□ -2.51
Ccdc88bQ4QRL3 Gm14657-201ENSMUST00000117461 302 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Gm22764-201ENSMUST00000158370 92 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Gm25243-201ENSMUST00000174912 207 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Gm37102-201ENSMUST00000195740 1105 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 AC069561.3-201ENSMUST00000217321 114 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 AC154730.1-201ENSMUST00000227874 816 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Gm24582-201ENSMUST00000103967 103 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Gm13482-201ENSMUST00000119842 254 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 AC132104.1-201ENSMUST00000213615 260 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 AC152979.4-201ENSMUST00000219893 379 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Gm22810-201ENSMUST00000082741 158 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Snora75-201ENSMUST00000082903 133 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Mir183-201ENSMUST00000083685 70 ntBASIC-0.67□□□□□ -2.52
Ccdc88bQ4QRL3 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.68□□□□□ -2.52
Ccdc88bQ4QRL3 Gm15914-201ENSMUST00000161922 309 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms