Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm25794-201ENSMUST00000083286 107 ntBASIC1.37□□□□□ -2.19
Shank3Q4ACU6 Gm25577-201ENSMUST00000083414 107 ntBASIC1.37□□□□□ -2.19
Shank3Q4ACU6 Gm24861-201ENSMUST00000083459 107 ntBASIC1.37□□□□□ -2.19
Shank3Q4ACU6 Mir27b-201ENSMUST00000083541 73 ntBASIC1.37□□□□□ -2.19
Shank3Q4ACU6 Gm23103-201ENSMUST00000083725 107 ntBASIC1.37□□□□□ -2.19
Shank3Q4ACU6 Gm23732-201ENSMUST00000083751 107 ntBASIC1.37□□□□□ -2.19
Shank3Q4ACU6 Gm22352-201ENSMUST00000083917 107 ntBASIC1.37□□□□□ -2.19
Shank3Q4ACU6 Gm24448-201ENSMUST00000083979 107 ntBASIC1.37□□□□□ -2.19
Shank3Q4ACU6 Gm22886-201ENSMUST00000093714 107 ntBASIC1.37□□□□□ -2.19
Shank3Q4ACU6 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.37□□□□□ -2.19
Shank3Q4ACU6 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Gm15365-201ENSMUST00000122392 300 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Gm23829-201ENSMUST00000157392 270 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Gm23557-201ENSMUST00000157820 138 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Gm22483-201ENSMUST00000157986 274 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Gm44182-201ENSMUST00000204052 115 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.36□□□□□ -2.19
Shank3Q4ACU6 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Snord14a-201ENSMUST00000082807 87 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Gm26265-201ENSMUST00000083277 135 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Mir141-201ENSMUST00000083540 72 ntBASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Shank3Q4ACU6 Gm15010-201ENSMUST00000117153 407 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm24481-201ENSMUST00000157210 102 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm23381-201ENSMUST00000157676 94 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm23411-201ENSMUST00000157988 62 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm23022-201ENSMUST00000158768 180 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm23059-201ENSMUST00000158978 107 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm19932-201ENSMUST00000177033 313 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm28343-201ENSMUST00000185386 112 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.35□□□□□ -2.19
Shank3Q4ACU6 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm23614-201ENSMUST00000082598 107 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm22709-201ENSMUST00000116893 111 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm25625-201ENSMUST00000157221 96 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm25711-201ENSMUST00000158633 128 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm27419-201ENSMUST00000184576 109 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Mir195b-201ENSMUST00000184814 97 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm27588-201ENSMUST00000185096 263 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Mir6376-201ENSMUST00000185149 131 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm44794-201ENSMUST00000206550 411 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm44910-201ENSMUST00000208451 396 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm26066-201ENSMUST00000083385 109 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm22577-201ENSMUST00000083731 109 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.35□□□□□ -2.19
Shank3Q4ACU6 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.34□□□□□ -2.19
Shank3Q4ACU6 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.34□□□□□ -2.19
Shank3Q4ACU6 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm24049-201ENSMUST00000102409 100 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm14530-201ENSMUST00000122391 333 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm23466-201ENSMUST00000157133 106 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm22037-201ENSMUST00000157280 296 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm26501-201ENSMUST00000178307 107 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm27511-201ENSMUST00000183502 127 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm18356-201ENSMUST00000185677 623 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm38395-201ENSMUST00000199904 830 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm44446-201ENSMUST00000204864 255 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.34□□□□□ -2.2
Shank3Q4ACU6 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.34□□□□□ -2.2
Shank3Q4ACU6 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Gm22678-201ENSMUST00000116974 101 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Gm18588-201ENSMUST00000177308 492 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Gm29231-201ENSMUST00000179850 319 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Gm37361-201ENSMUST00000194345 132 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Gm44564-201ENSMUST00000207985 180 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Gm18854-201ENSMUST00000211196 329 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 211 ms