Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm37338-201ENSMUST00000191986 127 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm43583-201ENSMUST00000199235 303 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trim40Q3UWA4 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm24151-201ENSMUST00000082758 141 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm24237-201ENSMUST00000157790 132 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm24618-201ENSMUST00000177718 94 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm23953-201ENSMUST00000178214 94 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm21885-201ENSMUST00000178891 327 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm26332-201ENSMUST00000179813 94 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm22863-201ENSMUST00000180265 94 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm27511-201ENSMUST00000183502 127 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm27979-201ENSMUST00000185126 56 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm28408-201ENSMUST00000191557 463 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm45207-201ENSMUST00000207469 145 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm44666-201ENSMUST00000208544 391 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim40Q3UWA4 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm24152-201ENSMUST00000082764 163 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm25124-201ENSMUST00000083345 164 ntBASIC1.86□□□□□ -2.11
Trim40Q3UWA4 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm26015-201ENSMUST00000104402 125 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm13581-201ENSMUST00000120675 278 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm24896-201ENSMUST00000122741 135 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm14298-201ENSMUST00000139032 237 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm16356-201ENSMUST00000143300 169 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm24010-201ENSMUST00000157731 282 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm22159-201ENSMUST00000158412 130 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Mir28b-201ENSMUST00000175399 80 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm21827-201ENSMUST00000178247 423 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm5900-201ENSMUST00000179862 375 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm28058-201ENSMUST00000186421 264 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm43250-201ENSMUST00000196536 273 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Mir7661-201ENSMUST00000197023 61 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm44482-201ENSMUST00000199232 103 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Gm42578-201ENSMUST00000199960 194 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trim40Q3UWA4 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm14782-201ENSMUST00000120151 195 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm24783-201ENSMUST00000157639 100 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm22500-201ENSMUST00000158982 99 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm23921-201ENSMUST00000175258 107 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm20613-201ENSMUST00000175828 345 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm26200-201ENSMUST00000180273 79 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Mir6995-201ENSMUST00000183658 71 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm28008-201ENSMUST00000184021 186 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm28579-201ENSMUST00000186143 369 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm42807-201ENSMUST00000200141 329 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm23625-201ENSMUST00000082457 100 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Mir32-201ENSMUST00000083610 70 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm23345-201ENSMUST00000083817 150 ntBASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.84□□□□□ -2.11
Trim40Q3UWA4 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Trim40Q3UWA4 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm12351-201ENSMUST00000118727 292 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm6829-201ENSMUST00000119858 360 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm25113-201ENSMUST00000157185 143 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm27544-201ENSMUST00000185069 155 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm19777-201ENSMUST00000191940 358 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm19901-201ENSMUST00000192191 495 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm43587-201ENSMUST00000199590 204 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Mir497-201ENSMUST00000200557 84 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm44564-201ENSMUST00000207985 180 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.83□□□□□ -2.12
Trim40Q3UWA4 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm24412-201ENSMUST00000083426 109 ntBASIC1.83□□□□□ -2.12
Trim40Q3UWA4 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trim40Q3UWA4 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trim40Q3UWA4 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.82□□□□□ -2.12
Trim40Q3UWA4 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.82□□□□□ -2.12
Trim40Q3UWA4 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trim40Q3UWA4 Mir669i-201ENSMUST00000117007 127 ntBASIC1.82□□□□□ -2.12
Trim40Q3UWA4 Mir1b-201ENSMUST00000117012 122 ntBASIC1.82□□□□□ -2.12
Trim40Q3UWA4 Gm9059-201ENSMUST00000118319 183 ntBASIC1.82□□□□□ -2.12
Trim40Q3UWA4 Gm13992-201ENSMUST00000120558 156 ntBASIC1.82□□□□□ -2.12
Trim40Q3UWA4 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms