Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm11512-201ENSMUST00000119669 663 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm23122-201ENSMUST00000157645 103 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm24573-201ENSMUST00000175499 112 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm21737-201ENSMUST00000178112 664 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm26180-201ENSMUST00000179942 107 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm20901-201ENSMUST00000180177 664 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm28090-201ENSMUST00000189458 664 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm21647-201ENSMUST00000189755 664 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm37128-201ENSMUST00000192599 232 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm9251-201ENSMUST00000197202 628 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm23627-201ENSMUST00000082459 107 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm22502-201ENSMUST00000082488 107 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm22062-201ENSMUST00000082563 107 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm22977-201ENSMUST00000082615 107 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm24149-201ENSMUST00000082757 107 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Gm23462-201ENSMUST00000083264 104 ntBASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.59□□□□□ -2.15
Upf3aQ3ULJ3 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
Upf3aQ3ULJ3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm24282-201ENSMUST00000104232 66 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm23336-201ENSMUST00000117023 123 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm15010-201ENSMUST00000117153 407 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm22308-201ENSMUST00000177609 107 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm45403-201ENSMUST00000209453 276 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm2829-201ENSMUST00000213121 499 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm22997-201ENSMUST00000082845 107 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Rny3-201ENSMUST00000083011 102 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm26066-201ENSMUST00000083385 109 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm25896-201ENSMUST00000083713 136 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm26175-201ENSMUST00000083794 131 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Upf3aQ3ULJ3 Gm23589-201ENSMUST00000157660 105 ntBASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 Gm26194-201ENSMUST00000175036 71 ntBASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 Gm25956-201ENSMUST00000175115 217 ntBASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 Gm25933-201ENSMUST00000178943 108 ntBASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 Gm23191-201ENSMUST00000179147 107 ntBASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 Gm27493-201ENSMUST00000184128 78 ntBASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 Gm18291-201ENSMUST00000190791 301 ntBASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.57□□□□□ -2.16
Upf3aQ3ULJ3 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Mir701-201ENSMUST00000102208 109 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm26082-201ENSMUST00000104070 127 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm23172-201ENSMUST00000157160 124 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm26049-201ENSMUST00000157313 108 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm24810-201ENSMUST00000175317 70 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm28200-201ENSMUST00000187778 315 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm29378-201ENSMUST00000188723 315 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm28909-201ENSMUST00000189406 315 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm44337-201ENSMUST00000196553 114 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm43723-201ENSMUST00000196886 189 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Mir3961-201ENSMUST00000198795 59 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm43406-201ENSMUST00000200356 334 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Gm43914-201ENSMUST00000203592 594 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Upf3aQ3ULJ3 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 BC022960-201ENSMUST00000119987 1815 ntBASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Gm27926-201ENSMUST00000157180 66 ntBASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Gm22768-201ENSMUST00000158366 153 ntBASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Gm25486-201ENSMUST00000158726 63 ntBASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Mir3098-201ENSMUST00000175416 87 ntBASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Gm25121-201ENSMUST00000179846 79 ntBASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms