Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm9318-201ENSMUST00000222444 438 ntBASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm23142-201ENSMUST00000101848 105 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm26240-201ENSMUST00000101893 105 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Mir669l-201ENSMUST00000103771 98 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm12926-201ENSMUST00000121158 409 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm12785-201ENSMUST00000122052 172 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm25781-201ENSMUST00000122527 84 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm23779-201ENSMUST00000157938 64 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm22316-201ENSMUST00000158012 216 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm24394-201ENSMUST00000158141 123 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm24726-201ENSMUST00000158232 121 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm25012-201ENSMUST00000158396 164 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm17919-201ENSMUST00000173344 312 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm37778-201ENSMUST00000191732 190 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm44468-201ENSMUST00000199516 105 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm44654-201ENSMUST00000208052 329 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm22685-201ENSMUST00000082848 106 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm22683-201ENSMUST00000082854 137 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm26111-201ENSMUST00000083969 106 ntBASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trafd1Q3UDK1 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Gm11859-201ENSMUST00000118099 455 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Gm12235-201ENSMUST00000118596 170 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Gm16362-201ENSMUST00000135189 214 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Gm16358-201ENSMUST00000146046 210 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Gm25368-201ENSMUST00000158847 131 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Gm26400-201ENSMUST00000175012 85 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Gm21978-201ENSMUST00000179696 377 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Gm44960-201ENSMUST00000207403 141 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Gm25937-201ENSMUST00000083912 107 ntBASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Trafd1Q3UDK1 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Gm22800-201ENSMUST00000175627 94 ntBASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Gm24308-201ENSMUST00000177773 114 ntBASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Gm37313-201ENSMUST00000191673 290 ntBASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Gm18991-201ENSMUST00000209225 746 ntBASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Gm26265-201ENSMUST00000083277 135 ntBASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trafd1Q3UDK1 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm26249-201ENSMUST00000116708 118 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm15010-201ENSMUST00000117153 407 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm24053-201ENSMUST00000158620 105 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm17100-201ENSMUST00000168963 272 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm24572-201ENSMUST00000175505 88 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm25284-201ENSMUST00000180345 141 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm27640-201ENSMUST00000184580 147 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm19777-201ENSMUST00000191940 358 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm44063-201ENSMUST00000203307 376 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm2829-201ENSMUST00000213121 499 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trafd1Q3UDK1 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm22678-201ENSMUST00000116974 101 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm11935-201ENSMUST00000118608 399 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm13432-201ENSMUST00000118861 241 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm5396-201ENSMUST00000121222 532 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm23589-201ENSMUST00000157660 105 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm23381-201ENSMUST00000157676 94 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm23262-201ENSMUST00000158323 168 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm22113-201ENSMUST00000158343 104 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm22434-201ENSMUST00000158549 122 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm24573-201ENSMUST00000175499 112 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm28579-201ENSMUST00000186143 369 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm29005-201ENSMUST00000186773 320 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms