Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ddb1Q3U1J4 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Ddb1Q3U1J4 Mir881-201ENSMUST00000104844 78 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Mdga2-203ENSMUST00000113942 423 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm24640-201ENSMUST00000116949 126 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm22626-201ENSMUST00000116990 126 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm13714-201ENSMUST00000117313 221 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm14770-201ENSMUST00000122197 312 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm23670-201ENSMUST00000157469 119 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm25454-201ENSMUST00000157947 315 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm24818-201ENSMUST00000175093 161 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm24761-201ENSMUST00000179589 127 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm24488-201ENSMUST00000179934 127 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm25701-201ENSMUST00000179988 127 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm26431-201ENSMUST00000180199 127 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Mir6997-201ENSMUST00000184313 71 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm42672-201ENSMUST00000197821 352 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm43901-201ENSMUST00000203247 453 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Gm23247-201ENSMUST00000083373 107 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.24□□□□□ -1.89
Ddb1Q3U1J4 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm23950-201ENSMUST00000104026 129 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm25875-201ENSMUST00000104323 107 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm23202-201ENSMUST00000104376 129 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm14774-201ENSMUST00000117857 536 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm22911-201ENSMUST00000177920 107 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm27582-201ENSMUST00000184084 126 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Mir7026-201ENSMUST00000184384 67 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm28849-201ENSMUST00000188127 174 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm28921-201ENSMUST00000190219 378 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm28330-201ENSMUST00000190353 171 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm44977-201ENSMUST00000205283 420 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm22358-201ENSMUST00000082877 122 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm25188-201ENSMUST00000083913 122 ntBASIC3.23□□□□□ -1.89
Ddb1Q3U1J4 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Gm22803-201ENSMUST00000158049 283 ntBASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Gm22433-201ENSMUST00000158550 142 ntBASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Gm22527-201ENSMUST00000158816 106 ntBASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Gm29553-201ENSMUST00000189692 279 ntBASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Gm25820-201ENSMUST00000198589 127 ntBASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Ddb1Q3U1J4 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Ddb1Q3U1J4 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Ddb1Q3U1J4 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm23766-201ENSMUST00000103894 80 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm23988-201ENSMUST00000117034 122 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm26479-201ENSMUST00000122620 106 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm26411-201ENSMUST00000157668 107 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm43991-201ENSMUST00000203751 274 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm24356-201ENSMUST00000082859 106 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm22294-201ENSMUST00000083308 104 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.21□□□□□ -1.9
Ddb1Q3U1J4 Gm22270-201ENSMUST00000104034 132 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm22658-201ENSMUST00000104196 155 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm14073-201ENSMUST00000117344 381 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm25805-201ENSMUST00000122788 108 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm23901-201ENSMUST00000157570 107 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm22192-201ENSMUST00000175128 85 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm22259-201ENSMUST00000178926 107 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Mir376a-201ENSMUST00000197584 68 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm43512-201ENSMUST00000198495 176 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm18346-201ENSMUST00000216782 325 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm25632-201ENSMUST00000083112 85 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm23264-201ENSMUST00000083372 107 ntBASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ddb1Q3U1J4 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.19□□□□□ -1.9
Ddb1Q3U1J4 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 173 ms