Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col8a1Q00780 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm22674-201ENSMUST00000104413 131 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm26145-201ENSMUST00000104476 127 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Snord90-201ENSMUST00000104568 111 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm23791-201ENSMUST00000122553 293 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm25069-201ENSMUST00000175238 86 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm37545-201ENSMUST00000186512 148 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm37204-201ENSMUST00000192389 3961 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm37431-201ENSMUST00000195102 111 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm9251-201ENSMUST00000197202 628 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm43155-201ENSMUST00000202661 494 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Gm44399-201ENSMUST00000205043 226 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col8a1Q00780 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col8a1Q00780 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col8a1Q00780 Mir450b-201ENSMUST00000102095 82 ntBASIC2.88□□□□□ -1.95
Col8a1Q00780 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.88□□□□□ -1.95
Col8a1Q00780 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.88□□□□□ -1.95
Col8a1Q00780 Gm23434-201ENSMUST00000157179 100 ntBASIC2.88□□□□□ -1.95
Col8a1Q00780 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.88□□□□□ -1.95
Col8a1Q00780 Gm26379-202ENSMUST00000200225 132 ntBASIC2.88□□□□□ -1.95
Col8a1Q00780 Gm43993-201ENSMUST00000203972 247 ntBASIC2.88□□□□□ -1.95
Col8a1Q00780 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.88□□□□□ -1.95
Col8a1Q00780 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col8a1Q00780 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Col8a1Q00780 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col8a1Q00780 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col8a1Q00780 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col8a1Q00780 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col8a1Q00780 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col8a1Q00780 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col8a1Q00780 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm14518-201ENSMUST00000117351 542 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm6952-201ENSMUST00000118629 159 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm24440-201ENSMUST00000157236 63 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm22845-201ENSMUST00000157712 104 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm24959-201ENSMUST00000157924 146 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm17161-201ENSMUST00000169187 524 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm24512-201ENSMUST00000174963 65 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm37290-201ENSMUST00000195775 339 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Mir3969-201ENSMUST00000197106 92 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm22299-201ENSMUST00000082663 136 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Col8a1Q00780 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col8a1Q00780 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Col8a1Q00780 Gm37176-201ENSMUST00000193300 4051 ntBASIC2.87□□□□□ -1.95
Col8a1Q00780 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col8a1Q00780 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col8a1Q00780 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col8a1Q00780 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.86□□□□□ -1.95
Col8a1Q00780 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm24283-201ENSMUST00000104233 107 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Mir1198-201ENSMUST00000116995 121 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm24691-201ENSMUST00000157762 140 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm25889-201ENSMUST00000157775 107 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm25444-201ENSMUST00000158999 113 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Snord92-201ENSMUST00000175548 85 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm7258-201ENSMUST00000179317 300 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm23963-201ENSMUST00000179603 77 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm6947-201ENSMUST00000186254 78 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm29553-201ENSMUST00000189692 279 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm34139-201ENSMUST00000196166 294 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm42844-201ENSMUST00000200355 112 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.86□□□□□ -1.95
Col8a1Q00780 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm24461-201ENSMUST00000082735 103 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Snord35b-201ENSMUST00000082833 87 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm25789-201ENSMUST00000083294 76 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm23847-201ENSMUST00000083829 110 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Gm24030-201ENSMUST00000083931 164 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col8a1Q00780 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col8a1Q00780 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.86□□□□□ -1.95
Col8a1Q00780 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Col8a1Q00780 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col8a1Q00780 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col8a1Q00780 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Snord89-201ENSMUST00000104516 110 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm15861-201ENSMUST00000120979 339 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm22553-201ENSMUST00000157797 295 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm26215-201ENSMUST00000158584 139 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm25707-201ENSMUST00000175120 96 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm27532-201ENSMUST00000183726 113 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Trbv7-201ENSMUST00000193339 402 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm37575-201ENSMUST00000195467 309 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms