Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm13756-201ENSMUST00000117618 222 ntBASIC2.6□□□□□ -1.99
Lig3P97386 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.6□□□□□ -1.99
Lig3P97386 Gm16354-201ENSMUST00000155376 150 ntBASIC2.6□□□□□ -1.99
Lig3P97386 Gm23600-201ENSMUST00000157260 71 ntBASIC2.6□□□□□ -1.99
Lig3P97386 Gm24601-201ENSMUST00000157970 143 ntBASIC2.6□□□□□ -1.99
Lig3P97386 Gm24177-201ENSMUST00000158927 131 ntBASIC2.6□□□□□ -1.99
Lig3P97386 Gm5224-201ENSMUST00000183060 350 ntBASIC2.6□□□□□ -1.99
Lig3P97386 Gm43250-201ENSMUST00000196536 273 ntBASIC2.6□□□□□ -1.99
Lig3P97386 Gm6615-201ENSMUST00000199426 631 ntBASIC2.6□□□□□ -1.99
Lig3P97386 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.6□□□□□ -1.99
Lig3P97386 Gm25482-201ENSMUST00000083225 107 ntBASIC2.6□□□□□ -1.99
Lig3P97386 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
Lig3P97386 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Lig3P97386 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm14894-201ENSMUST00000117170 270 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm25113-201ENSMUST00000157185 143 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm22336-201ENSMUST00000157719 107 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm23196-201ENSMUST00000158806 107 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm22308-201ENSMUST00000177609 107 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm25450-201ENSMUST00000179144 107 ntBASIC2.59□□□□□ -1.99
Lig3P97386 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.59□□□□□ -1.99
Lig3P97386 Gm37449-201ENSMUST00000193016 270 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm18658-201ENSMUST00000195558 270 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Mir376a-201ENSMUST00000197584 68 ntBASIC2.59□□□□□ -1.99
Lig3P97386 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm22997-201ENSMUST00000082845 107 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm23041-201ENSMUST00000083868 106 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm25257-201ENSMUST00000083907 110 ntBASIC2.59□□□□□ -1.99
Lig3P97386 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.59□□□□□ -2
Lig3P97386 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.59□□□□□ -2
Lig3P97386 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Lig3P97386 Mir701-201ENSMUST00000102208 109 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm13714-201ENSMUST00000117313 221 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm15896-201ENSMUST00000118045 440 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm11572-201ENSMUST00000119164 120 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm15223-201ENSMUST00000120989 826 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm23752-201ENSMUST00000157584 115 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm23759-201ENSMUST00000158351 268 ntBASIC2.58□□□□□ -2
Lig3P97386 Mir1927-201ENSMUST00000158579 109 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm29262-201ENSMUST00000190084 196 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm28921-201ENSMUST00000190219 378 ntBASIC2.58□□□□□ -2
Lig3P97386 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.58□□□□□ -2
Lig3P97386 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.58□□□□□ -2
Lig3P97386 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.58□□□□□ -2
Lig3P97386 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.58□□□□□ -2
Lig3P97386 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm25078-201ENSMUST00000082530 107 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm25930-201ENSMUST00000082785 107 ntBASIC2.58□□□□□ -2
Lig3P97386 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.58□□□□□ -2
Lig3P97386 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Lig3P97386 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Lig3P97386 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.57□□□□□ -2
Lig3P97386 Gm23705-201ENSMUST00000104370 130 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm24640-201ENSMUST00000116949 126 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm22626-201ENSMUST00000116990 126 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm5396-201ENSMUST00000121222 532 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm16355-201ENSMUST00000128606 231 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.57□□□□□ -2
Lig3P97386 Gm22433-201ENSMUST00000158550 142 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm24348-201ENSMUST00000158710 130 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm6788-201ENSMUST00000166459 270 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm24761-201ENSMUST00000179589 127 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm24488-201ENSMUST00000179934 127 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm25701-201ENSMUST00000179988 127 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm26431-201ENSMUST00000180199 127 ntBASIC2.57□□□□□ -2
Lig3P97386 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm42672-201ENSMUST00000197821 352 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm45296-201ENSMUST00000209625 205 ntBASIC2.57□□□□□ -2
Lig3P97386 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.57□□□□□ -2
Lig3P97386 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.57□□□□□ -2
Lig3P97386 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.57□□□□□ -2
Lig3P97386 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm23249-201ENSMUST00000083369 161 ntBASIC2.57□□□□□ -2
Lig3P97386 Mir137-201ENSMUST00000083635 73 ntBASIC2.57□□□□□ -2
Lig3P97386 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.57□□□□□ -2
Lig3P97386 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.57□□□□□ -2
Lig3P97386 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Lig3P97386 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Lig3P97386 Gm24126-201ENSMUST00000104111 106 ntBASIC2.56□□□□□ -2
Lig3P97386 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.56□□□□□ -2
Lig3P97386 Gm14551-201ENSMUST00000120802 256 ntBASIC2.56□□□□□ -2
Lig3P97386 Gm26275-201ENSMUST00000157101 268 ntBASIC2.56□□□□□ -2
Lig3P97386 Gm26186-201ENSMUST00000157689 125 ntBASIC2.56□□□□□ -2
Lig3P97386 Gm23476-201ENSMUST00000158881 274 ntBASIC2.56□□□□□ -2
Lig3P97386 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.56□□□□□ -2
Lig3P97386 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.56□□□□□ -2
Lig3P97386 Gm22259-201ENSMUST00000178926 107 ntBASIC2.56□□□□□ -2
Lig3P97386 Gm36946-201ENSMUST00000192706 435 ntBASIC2.56□□□□□ -2
Lig3P97386 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.56□□□□□ -2
Lig3P97386 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Lig3P97386 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.56□□□□□ -2
Lig3P97386 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Lig3P97386 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.55□□□□□ -2
Lig3P97386 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.55□□□□□ -2
Lig3P97386 Gm12941-201ENSMUST00000117934 220 ntBASIC2.55□□□□□ -2
Lig3P97386 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.55□□□□□ -2
Lig3P97386 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.55□□□□□ -2
Lig3P97386 Gm23901-201ENSMUST00000157570 107 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms