Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm44533-201ENSMUST00000207782 268 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Gm45344-201ENSMUST00000211610 341 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Gm5023-201ENSMUST00000217442 587 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 CT010505.1-201ENSMUST00000227026 396 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Ufd1P70362 Gm5899-201ENSMUST00000071770 270 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Ufd1P70362 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Mir1193-201ENSMUST00000116761 121 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm15986-201ENSMUST00000122153 400 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm26150-201ENSMUST00000157426 151 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm26405-201ENSMUST00000158495 100 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm24487-201ENSMUST00000178017 63 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm26200-201ENSMUST00000180273 79 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm27532-201ENSMUST00000183726 113 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm27410-201ENSMUST00000183851 115 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm10105-201ENSMUST00000184601 270 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm29167-201ENSMUST00000190024 377 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm38050-201ENSMUST00000191904 238 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm36953-201ENSMUST00000195295 268 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm43472-201ENSMUST00000200175 154 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Ufd1P70362 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm24406-201ENSMUST00000083026 128 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Mir193a-201ENSMUST00000083461 66 ntBASIC1.45□□□□□ -2.18
Ufd1P70362 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Ufd1P70362 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Ufd1P70362 Gm25094-201ENSMUST00000103992 131 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Gm15526-201ENSMUST00000112504 204 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Gm11862-201ENSMUST00000119678 659 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Gm15861-201ENSMUST00000120979 339 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Ufd1P70362 Gm25970-201ENSMUST00000157165 86 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Gm24851-201ENSMUST00000158028 103 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Gm25730-201ENSMUST00000178753 165 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Gm25253-201ENSMUST00000179958 107 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Gm27248-201ENSMUST00000184004 166 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Gm27399-201ENSMUST00000184250 78 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Mir7678-201ENSMUST00000185076 71 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.44□□□□□ -2.18
Ufd1P70362 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.44□□□□□ -2.18
Ufd1P70362 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.44□□□□□ -2.18
Ufd1P70362 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
Ufd1P70362 Gm23175-201ENSMUST00000104371 132 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm11798-201ENSMUST00000119150 421 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm15030-201ENSMUST00000119804 484 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm23854-201ENSMUST00000158378 108 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm24499-201ENSMUST00000158446 104 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm24618-201ENSMUST00000177718 94 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm23953-201ENSMUST00000178214 94 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm24799-201ENSMUST00000178431 79 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm26332-201ENSMUST00000179813 94 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm22863-201ENSMUST00000180265 94 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm9156-201ENSMUST00000189660 463 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm44384-201ENSMUST00000200208 114 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm44149-201ENSMUST00000204256 226 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm44960-201ENSMUST00000207403 141 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm44811-201ENSMUST00000209120 228 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm45907-201ENSMUST00000213023 193 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.43□□□□□ -2.18
Ufd1P70362 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Ufd1P70362 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Snord118-201ENSMUST00000082965 135 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm24536-201ENSMUST00000083144 107 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm23100-201ENSMUST00000083455 141 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm24817-201ENSMUST00000093672 105 ntBASIC1.43□□□□□ -2.18
Ufd1P70362 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Ufd1P70362 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Ufd1P70362 Gm24274-201ENSMUST00000116787 124 ntBASIC1.42□□□□□ -2.18
Ufd1P70362 Gm25434-201ENSMUST00000158278 167 ntBASIC1.42□□□□□ -2.18
Ufd1P70362 Mir1936-201ENSMUST00000158699 93 ntBASIC1.42□□□□□ -2.18
Ufd1P70362 Gm22500-201ENSMUST00000158982 99 ntBASIC1.42□□□□□ -2.18
Ufd1P70362 Mir6901-201ENSMUST00000185062 62 ntBASIC1.42□□□□□ -2.18
Ufd1P70362 Gm44477-201ENSMUST00000199661 110 ntBASIC1.42□□□□□ -2.18
Ufd1P70362 Gm35736-201ENSMUST00000203681 313 ntBASIC1.42□□□□□ -2.18
Ufd1P70362 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.42□□□□□ -2.18
Ufd1P70362 Gm22685-201ENSMUST00000082848 106 ntBASIC1.42□□□□□ -2.18
Ufd1P70362 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Ufd1P70362 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Ufd1P70362 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Ufd1P70362 Mir1b-201ENSMUST00000117012 122 ntBASIC1.41□□□□□ -2.18
Ufd1P70362 Gm11859-201ENSMUST00000118099 455 ntBASIC1.41□□□□□ -2.18
Ufd1P70362 Gm9059-201ENSMUST00000118319 183 ntBASIC1.41□□□□□ -2.18
Ufd1P70362 Gm13581-201ENSMUST00000120675 278 ntBASIC1.41□□□□□ -2.18
Ufd1P70362 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 125.9 ms