Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.11□□□□□ -2.07
Cdh11P55288 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Cdh11P55288 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.11□□□□□ -2.07
Cdh11P55288 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cdh11P55288 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Cdh11P55288 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Cdh11P55288 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Cdh11P55288 Gm26342-201ENSMUST00000104557 129 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm13714-201ENSMUST00000117313 221 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm14774-201ENSMUST00000117857 536 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm14588-201ENSMUST00000119895 172 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm14215-201ENSMUST00000120578 221 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Mir1898-201ENSMUST00000122643 83 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm16355-201ENSMUST00000128606 231 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm8121-201ENSMUST00000153583 499 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm22083-201ENSMUST00000157586 102 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm23581-201ENSMUST00000158531 63 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm6788-201ENSMUST00000166459 270 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Mir5118-201ENSMUST00000175551 67 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm21827-201ENSMUST00000178247 423 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm28169-201ENSMUST00000190342 345 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.1□□□□□ -2.07
Cdh11P55288 Gm42594-201ENSMUST00000199511 246 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm43914-201ENSMUST00000203592 594 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm25078-201ENSMUST00000082530 107 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Cdh11P55288 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.1□□□□□ -2.07
Cdh11P55288 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Cdh11P55288 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Cdh11P55288 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Gm13992-201ENSMUST00000120558 156 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Gm22814-201ENSMUST00000157452 104 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Gm22517-201ENSMUST00000158265 136 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Gm24769-201ENSMUST00000158506 129 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Gm23005-201ENSMUST00000158950 136 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Gm28058-201ENSMUST00000186421 264 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Gm18357-201ENSMUST00000188184 580 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Mir3970-201ENSMUST00000199287 90 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 mt-Td-201ENSMUST00000082404 70 ntBASIC2.09□□□□□ -2.07
Cdh11P55288 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.09□□□□□ -2.07
Cdh11P55288 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.08□□□□□ -2.08
Cdh11P55288 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Cdh11P55288 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 Gm23941-201ENSMUST00000101953 107 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 Gm22752-201ENSMUST00000102083 109 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.08□□□□□ -2.08
Cdh11P55288 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Cdh11P55288 Gm25863-201ENSMUST00000158249 329 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 Gm25012-201ENSMUST00000158396 164 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Cdh11P55288 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdh11P55288 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Cdh11P55288 Gm43676-201ENSMUST00000197532 540 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 Mir376a-201ENSMUST00000197584 68 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdh11P55288 Gm45005-201ENSMUST00000206640 157 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Cdh11P55288 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Cdh11P55288 Gm24356-201ENSMUST00000082859 106 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 Gm24661-201ENSMUST00000083205 104 ntBASIC2.08□□□□□ -2.08
Cdh11P55288 Gm25111-201ENSMUST00000116686 147 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm22713-201ENSMUST00000116895 130 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm13711-201ENSMUST00000119708 453 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm11786-201ENSMUST00000120799 155 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm25910-201ENSMUST00000157620 140 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm22483-201ENSMUST00000157986 274 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm24847-201ENSMUST00000158032 108 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm24501-201ENSMUST00000158452 62 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm23474-201ENSMUST00000158884 75 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm25450-201ENSMUST00000179144 107 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm27271-201ENSMUST00000183509 170 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Mir6925-201ENSMUST00000197857 70 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm44655-201ENSMUST00000207768 423 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm45296-201ENSMUST00000209625 205 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm45313-201ENSMUST00000210584 178 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm24698-201ENSMUST00000083883 130 ntBASIC2.07□□□□□ -2.08
Cdh11P55288 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Cdh11P55288 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Cdh11P55288 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Cdh11P55288 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Cdh11P55288 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.06□□□□□ -2.08
Cdh11P55288 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.06□□□□□ -2.08
Cdh11P55288 Gm11904-201ENSMUST00000120562 248 ntBASIC2.06□□□□□ -2.08
Cdh11P55288 Gm25805-201ENSMUST00000122788 108 ntBASIC2.06□□□□□ -2.08
Cdh11P55288 Gm16510-201ENSMUST00000153501 249 ntBASIC2.06□□□□□ -2.08
Cdh11P55288 Snord11-201ENSMUST00000158468 84 ntBASIC2.06□□□□□ -2.08
Cdh11P55288 Gm25642-201ENSMUST00000175137 66 ntBASIC2.06□□□□□ -2.08
Cdh11P55288 Mir7014-201ENSMUST00000183853 63 ntBASIC2.06□□□□□ -2.08
Cdh11P55288 Gm29005-201ENSMUST00000186773 320 ntBASIC2.06□□□□□ -2.08
Cdh11P55288 Gm19901-201ENSMUST00000192191 495 ntBASIC2.06□□□□□ -2.08
Cdh11P55288 Mir378a-201ENSMUST00000198300 66 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms