Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm16412-201ENSMUST00000121602 273 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Gm25294-201ENSMUST00000122791 104 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Mir3089-201ENSMUST00000175350 84 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Gm27428-201ENSMUST00000184289 110 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Gm27977-201ENSMUST00000185159 111 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Gm29490-201ENSMUST00000190923 342 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Gm44554-201ENSMUST00000208738 147 ntBASIC0.48□□□□□ -2.33
Cux1P53564 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.48□□□□□ -2.33
Cux1P53564 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Gm18696-201ENSMUST00000220103 274 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Gm9795-201ENSMUST00000062156 693 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Cux1P53564 Gm24254-201ENSMUST00000083702 104 ntBASIC0.48□□□□□ -2.33
Cux1P53564 Gm23836-201ENSMUST00000104434 129 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm14761-201ENSMUST00000121363 262 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm26152-201ENSMUST00000157427 101 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm25981-201ENSMUST00000157921 295 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm26405-201ENSMUST00000158495 100 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.47□□□□□ -2.33
Cux1P53564 Gm16404-201ENSMUST00000177739 468 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm7958-201ENSMUST00000178255 468 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm7950-201ENSMUST00000179633 468 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm25156-201ENSMUST00000179809 79 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm14598-201ENSMUST00000180109 468 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm14625-201ENSMUST00000180231 468 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm28412-201ENSMUST00000187243 177 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm43529-201ENSMUST00000199178 412 ntBASIC0.47□□□□□ -2.33
Cux1P53564 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Cux1P53564 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Cux1P53564 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Cux1P53564 Gm13396-201ENSMUST00000120617 271 ntBASIC0.46□□□□□ -2.34
Cux1P53564 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.46□□□□□ -2.34
Cux1P53564 Gm25663-201ENSMUST00000157698 135 ntBASIC0.46□□□□□ -2.34
Cux1P53564 Gm23317-201ENSMUST00000157999 129 ntBASIC0.46□□□□□ -2.34
Cux1P53564 Mir6364-201ENSMUST00000183396 86 ntBASIC0.46□□□□□ -2.34
Cux1P53564 Gm37693-201ENSMUST00000194562 234 ntBASIC0.46□□□□□ -2.34
Cux1P53564 Gm37089-201ENSMUST00000195616 129 ntBASIC0.46□□□□□ -2.34
Cux1P53564 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.46□□□□□ -2.34
Cux1P53564 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Cux1P53564 Mir695-201ENSMUST00000102261 109 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm26143-201ENSMUST00000104480 108 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm22038-201ENSMUST00000157277 242 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm17052-201ENSMUST00000165496 289 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm23648-201ENSMUST00000180301 107 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm28560-201ENSMUST00000186091 315 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm28334-201ENSMUST00000186653 315 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm28495-201ENSMUST00000188452 315 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm28232-201ENSMUST00000188683 315 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm28481-201ENSMUST00000189231 315 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm29059-201ENSMUST00000191534 315 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm37765-201ENSMUST00000192395 315 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm37237-201ENSMUST00000192893 315 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm36968-201ENSMUST00000193737 315 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm36956-201ENSMUST00000193830 214 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm38290-201ENSMUST00000195238 315 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Mir6915-201ENSMUST00000198839 69 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm43004-201ENSMUST00000201872 703 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm43914-201ENSMUST00000203592 594 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm44211-201ENSMUST00000204867 145 ntBASIC0.45□□□□□ -2.34
Cux1P53564 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm23506-201ENSMUST00000083077 107 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm23104-201ENSMUST00000083722 104 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Mir362-201ENSMUST00000093592 65 ntBASIC0.45□□□□□ -2.34
Cux1P53564 Gm15175-201ENSMUST00000117629 132 ntBASIC0.44□□□□□ -2.34
Cux1P53564 Gm12806-201ENSMUST00000119384 268 ntBASIC0.44□□□□□ -2.34
Cux1P53564 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Cux1P53564 Gm2020-201ENSMUST00000145242 579 ntBASIC0.44□□□□□ -2.34
Cux1P53564 Gm23390-201ENSMUST00000157393 106 ntBASIC0.44□□□□□ -2.34
Cux1P53564 Gm26177-201ENSMUST00000178683 107 ntBASIC0.44□□□□□ -2.34
Cux1P53564 Gm4076-201ENSMUST00000179230 965 ntBASIC0.44□□□□□ -2.34
Cux1P53564 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
Cux1P53564 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Cux1P53564 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Cux1P53564 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.44□□□□□ -2.34
Cux1P53564 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Cux1P53564 Gm24977-201ENSMUST00000083106 163 ntBASIC0.44□□□□□ -2.34
Cux1P53564 Gm23203-201ENSMUST00000104374 107 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm25194-201ENSMUST00000177987 79 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.43□□□□□ -2.34
Cux1P53564 Gm28688-201ENSMUST00000187301 268 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.43□□□□□ -2.34
Cux1P53564 Trbv24-201ENSMUST00000194614 347 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm42570-201ENSMUST00000195937 292 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm44125-201ENSMUST00000203068 448 ntBASIC0.43□□□□□ -2.34
Cux1P53564 AC122341.1-201ENSMUST00000227291 560 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm26446-201ENSMUST00000082455 103 ntBASIC0.43□□□□□ -2.34
Cux1P53564 DQ267101-201ENSMUST00000082562 73 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm25578-201ENSMUST00000083406 104 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm14364-201ENSMUST00000129209 267 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm25011-201ENSMUST00000158398 126 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm27942-201ENSMUST00000184669 101 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm37727-201ENSMUST00000191637 819 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm46136-201ENSMUST00000214730 565 ntBASIC0.43□□□□□ -2.34
Cux1P53564 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.43□□□□□ -2.34
Cux1P53564 Gm26207-201ENSMUST00000082909 104 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms