Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.01□□□□□ -1.93
Shmt1P50431 Gm23738-201ENSMUST00000082828 171 ntBASIC3.01□□□□□ -1.93
Shmt1P50431 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Shmt1P50431 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.01□□□□□ -1.93
Shmt1P50431 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
Shmt1P50431 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Shmt1P50431 Gm15302-201ENSMUST00000117779 2630 ntBASIC3□□□□□ -1.93
Shmt1P50431 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Shmt1P50431 Mir1195-201ENSMUST00000116818 98 ntBASIC3□□□□□ -1.93
Shmt1P50431 Gm15272-201ENSMUST00000120865 233 ntBASIC3□□□□□ -1.93
Shmt1P50431 Gm25071-201ENSMUST00000175232 70 ntBASIC3□□□□□ -1.93
Shmt1P50431 Gm25935-201ENSMUST00000178746 107 ntBASIC3□□□□□ -1.93
Shmt1P50431 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3□□□□□ -1.93
Shmt1P50431 Gm45543-201ENSMUST00000209327 88 ntBASIC3□□□□□ -1.93
Shmt1P50431 AC098718.2-201ENSMUST00000226822 285 ntBASIC3□□□□□ -1.93
Shmt1P50431 AC165284.1-201ENSMUST00000228614 458 ntBASIC3□□□□□ -1.93
Shmt1P50431 Gm9174-201ENSMUST00000078149 255 ntBASIC3□□□□□ -1.93
Shmt1P50431 n-R5s40-201ENSMUST00000082475 124 ntBASIC3□□□□□ -1.93
Shmt1P50431 Gm26454-201ENSMUST00000082682 107 ntBASIC3□□□□□ -1.93
Shmt1P50431 Gm25813-201ENSMUST00000082748 191 ntBASIC3□□□□□ -1.93
Shmt1P50431 Gm22443-201ENSMUST00000082890 107 ntBASIC3□□□□□ -1.93
Shmt1P50431 Gm23850-201ENSMUST00000083830 169 ntBASIC3□□□□□ -1.93
Shmt1P50431 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Shmt1P50431 Gm12954-201ENSMUST00000118610 611 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 DQ267100-201ENSMUST00000122600 72 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Shmt1P50431 Gm24443-201ENSMUST00000157242 132 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 Gm23536-201ENSMUST00000157541 134 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 Gm24056-201ENSMUST00000158617 146 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 Gm27851-201ENSMUST00000183529 63 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 Gm27470-201ENSMUST00000184070 210 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 Gm43521-201ENSMUST00000197838 255 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 Gm43107-201ENSMUST00000198729 255 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Shmt1P50431 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 Gm24762-201ENSMUST00000083689 104 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.99□□□□□ -1.93
Shmt1P50431 Gm24163-201ENSMUST00000093660 132 ntBASIC2.99□□□□□ -1.93
Shmt1P50431 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Shmt1P50431 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Shmt1P50431 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Shmt1P50431 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
Shmt1P50431 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Shmt1P50431 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.98□□□□□ -1.93
Shmt1P50431 Gm14448-201ENSMUST00000116383 210 ntBASIC2.98□□□□□ -1.93
Shmt1P50431 Gm25270-201ENSMUST00000122606 138 ntBASIC2.98□□□□□ -1.93
Shmt1P50431 Gm25494-201ENSMUST00000158143 100 ntBASIC2.98□□□□□ -1.93
Shmt1P50431 Gm24131-201ENSMUST00000158539 107 ntBASIC2.98□□□□□ -1.93
Shmt1P50431 Gm29005-201ENSMUST00000186773 320 ntBASIC2.98□□□□□ -1.93
Shmt1P50431 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.98□□□□□ -1.93
Shmt1P50431 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.98□□□□□ -1.93
Shmt1P50431 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.98□□□□□ -1.93
Shmt1P50431 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.98□□□□□ -1.93
Shmt1P50431 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Shmt1P50431 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
Shmt1P50431 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Shmt1P50431 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Shmt1P50431 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Shmt1P50431 Gm23492-201ENSMUST00000116837 115 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 Gm11253-201ENSMUST00000118486 201 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.97□□□□□ -1.93
Shmt1P50431 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.97□□□□□ -1.93
Shmt1P50431 Gm24015-201ENSMUST00000157725 232 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 Gm25920-201ENSMUST00000158307 99 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 Gm24879-201ENSMUST00000158386 143 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 Gm25528-201ENSMUST00000180264 132 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 Gm27753-201ENSMUST00000184742 203 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 Gm44526-201ENSMUST00000204664 121 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.97□□□□□ -1.93
Shmt1P50431 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.97□□□□□ -1.93
Shmt1P50431 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
Shmt1P50431 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Shmt1P50431 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Shmt1P50431 Gm24582-201ENSMUST00000103967 103 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Gm25500-201ENSMUST00000104426 123 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Gm24892-201ENSMUST00000122747 104 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.96□□□□□ -1.94
Shmt1P50431 Gm25424-201ENSMUST00000157612 58 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Gm23589-201ENSMUST00000157660 105 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Gm23268-201ENSMUST00000175494 78 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.96□□□□□ -1.94
Shmt1P50431 Mir721-201ENSMUST00000200230 88 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.96□□□□□ -1.94
Shmt1P50431 Gm22978-201ENSMUST00000082607 160 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Gm24355-201ENSMUST00000082858 122 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.96□□□□□ -1.94
Shmt1P50431 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Shmt1P50431 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Shmt1P50431 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Shmt1P50431 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Shmt1P50431 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Shmt1P50431 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Shmt1P50431 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Shmt1P50431 Gm23277-201ENSMUST00000157914 136 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Gm24601-201ENSMUST00000157970 143 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Gm21827-201ENSMUST00000178247 423 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Gm43563-201ENSMUST00000196761 198 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms