Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.1□□□□□ -2.07
Traf1P39428 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Traf1P39428 Mir873a-201ENSMUST00000104863 77 ntBASIC2.09□□□□□ -2.07
Traf1P39428 Gm22193-201ENSMUST00000116868 76 ntBASIC2.09□□□□□ -2.07
Traf1P39428 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.09□□□□□ -2.07
Traf1P39428 Gm24222-201ENSMUST00000158834 93 ntBASIC2.09□□□□□ -2.07
Traf1P39428 Gm24810-201ENSMUST00000175317 70 ntBASIC2.09□□□□□ -2.07
Traf1P39428 Mir6346-201ENSMUST00000183982 81 ntBASIC2.09□□□□□ -2.07
Traf1P39428 Mir6950-201ENSMUST00000184438 73 ntBASIC2.09□□□□□ -2.07
Traf1P39428 Gm43427-201ENSMUST00000198188 331 ntBASIC2.09□□□□□ -2.07
Traf1P39428 Gm44655-201ENSMUST00000207768 423 ntBASIC2.09□□□□□ -2.07
Traf1P39428 Gm33654-201ENSMUST00000221704 215 ntBASIC2.09□□□□□ -2.07
Traf1P39428 Gm21937-201ENSMUST00000222825 218 ntBASIC2.09□□□□□ -2.07
Traf1P39428 CT010505.1-201ENSMUST00000227026 396 ntBASIC2.09□□□□□ -2.07
Traf1P39428 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Traf1P39428 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.09□□□□□ -2.08
Traf1P39428 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
Traf1P39428 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Traf1P39428 Gm25090-201ENSMUST00000104000 132 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm26396-201ENSMUST00000104093 132 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC2.08□□□□□ -2.08
Traf1P39428 Gm13432-201ENSMUST00000118861 241 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm22217-201ENSMUST00000157556 313 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm24211-201ENSMUST00000158264 107 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Snord87-201ENSMUST00000175437 87 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm26864-201ENSMUST00000181346 156 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm27317-201ENSMUST00000183533 95 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm37162-201ENSMUST00000191708 551 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm36953-201ENSMUST00000195295 268 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm18546-201ENSMUST00000197245 676 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm22683-201ENSMUST00000082854 137 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm24977-201ENSMUST00000083106 163 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm23731-201ENSMUST00000083749 107 ntBASIC2.08□□□□□ -2.08
Traf1P39428 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Traf1P39428 Gm25421-201ENSMUST00000104218 164 ntBASIC2.07□□□□□ -2.08
Traf1P39428 Gm23172-201ENSMUST00000157160 124 ntBASIC2.07□□□□□ -2.08
Traf1P39428 Gm22221-201ENSMUST00000157362 103 ntBASIC2.07□□□□□ -2.08
Traf1P39428 Gm22113-201ENSMUST00000158343 104 ntBASIC2.07□□□□□ -2.08
Traf1P39428 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Traf1P39428 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Traf1P39428 Gm32175-201ENSMUST00000193641 346 ntBASIC2.07□□□□□ -2.08
Traf1P39428 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.07□□□□□ -2.08
Traf1P39428 Gm22972-201ENSMUST00000083297 131 ntBASIC2.07□□□□□ -2.08
Traf1P39428 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Traf1P39428 Gm13729-201ENSMUST00000120328 406 ntBASIC2.06□□□□□ -2.08
Traf1P39428 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.06□□□□□ -2.08
Traf1P39428 Gm29397-201ENSMUST00000185205 333 ntBASIC2.06□□□□□ -2.08
Traf1P39428 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.06□□□□□ -2.08
Traf1P39428 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Traf1P39428 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.05□□□□□ -2.08
Traf1P39428 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Traf1P39428 Gm24079-201ENSMUST00000104352 132 ntBASIC2.05□□□□□ -2.08
Traf1P39428 Mir872-201ENSMUST00000104728 81 ntBASIC2.05□□□□□ -2.08
Traf1P39428 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.05□□□□□ -2.08
Traf1P39428 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.05□□□□□ -2.08
Traf1P39428 Gm22603-201ENSMUST00000157603 96 ntBASIC2.05□□□□□ -2.08
Traf1P39428 Gm23090-201ENSMUST00000177331 78 ntBASIC2.05□□□□□ -2.08
Traf1P39428 Gm22263-201ENSMUST00000180060 104 ntBASIC2.05□□□□□ -2.08
Traf1P39428 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Traf1P39428 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Traf1P39428 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.05□□□□□ -2.08
Traf1P39428 AC164297.5-201ENSMUST00000224365 198 ntBASIC2.05□□□□□ -2.08
Traf1P39428 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.05□□□□□ -2.08
Traf1P39428 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.05□□□□□ -2.08
Traf1P39428 Gm24805-201ENSMUST00000082931 104 ntBASIC2.05□□□□□ -2.08
Traf1P39428 Gm23721-201ENSMUST00000083005 107 ntBASIC2.05□□□□□ -2.08
Traf1P39428 Gm12417-201ENSMUST00000119153 403 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm13396-201ENSMUST00000120617 271 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm14678-201ENSMUST00000121396 482 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Gm25970-201ENSMUST00000157165 86 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm25909-201ENSMUST00000157619 121 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm24853-201ENSMUST00000158026 121 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm24076-201ENSMUST00000158179 94 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm25051-201ENSMUST00000158602 249 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm20462-201ENSMUST00000172623 408 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm20477-201ENSMUST00000174028 280 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm23289-201ENSMUST00000175615 108 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm24656-201ENSMUST00000177548 132 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Gm20257-202ENSMUST00000188643 130 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm19901-201ENSMUST00000192191 495 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Gm43624-201ENSMUST00000197368 180 ntBASIC2.04□□□□□ -2.08
Traf1P39428 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Traf1P39428 Gm7495-201ENSMUST00000215099 426 ntBASIC2.04□□□□□ -2.08
Traf1P39428 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.04□□□□□ -2.08
Traf1P39428 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Traf1P39428 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.03□□□□□ -2.08
Traf1P39428 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Traf1P39428 Mir301b-201ENSMUST00000102333 97 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms