Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm22713-201ENSMUST00000116895 130 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Gm26157-201ENSMUST00000158974 126 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Gm23289-201ENSMUST00000175615 108 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Gm23186-201ENSMUST00000180078 107 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Mir6346-201ENSMUST00000183982 81 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Mir7093-201ENSMUST00000184195 101 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Gm27544-201ENSMUST00000185069 155 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Gm28848-201ENSMUST00000189984 168 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Gm28211-201ENSMUST00000190920 315 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Gm43624-201ENSMUST00000197368 180 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Gm44482-201ENSMUST00000199232 103 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Gm5023-201ENSMUST00000217442 587 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.61□□□□□ -2.15
Cd40lgP27548 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Cd40lgP27548 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Cd40lgP27548 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.6□□□□□ -2.15
Cd40lgP27548 Gm24394-201ENSMUST00000158141 123 ntBASIC1.6□□□□□ -2.15
Cd40lgP27548 Gm16162-201ENSMUST00000162296 297 ntBASIC1.6□□□□□ -2.15
Cd40lgP27548 Gm10105-201ENSMUST00000184601 270 ntBASIC1.6□□□□□ -2.15
Cd40lgP27548 Gm38050-201ENSMUST00000191904 238 ntBASIC1.6□□□□□ -2.15
Cd40lgP27548 Gm26164-201ENSMUST00000083793 104 ntBASIC1.6□□□□□ -2.15
Cd40lgP27548 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.6□□□□□ -2.15
Cd40lgP27548 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.6□□□□□ -2.15
Cd40lgP27548 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm11854-201ENSMUST00000117839 446 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm25543-201ENSMUST00000122678 312 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm24896-201ENSMUST00000122741 135 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm23172-201ENSMUST00000157160 124 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm25115-201ENSMUST00000157187 140 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm23718-201ENSMUST00000157350 307 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm25909-201ENSMUST00000157619 121 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm24853-201ENSMUST00000158026 121 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm7953-201ENSMUST00000168278 469 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm24656-201ENSMUST00000177548 132 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Cd40lgP27548 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm29397-201ENSMUST00000185205 333 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm7654-201ENSMUST00000186738 683 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm37162-201ENSMUST00000191708 551 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm43427-201ENSMUST00000198188 331 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm43578-201ENSMUST00000201250 459 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.59□□□□□ -2.15
Cd40lgP27548 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Snord68-201ENSMUST00000082516 86 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm23721-201ENSMUST00000083005 107 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm23041-201ENSMUST00000083868 106 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm22365-201ENSMUST00000093750 117 ntBASIC1.59□□□□□ -2.15
Cd40lgP27548 Gm25377-201ENSMUST00000104334 129 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm14296-202ENSMUST00000108931 750 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm13396-201ENSMUST00000120617 271 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm22791-201ENSMUST00000157232 145 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm22113-201ENSMUST00000158343 104 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm23181-201ENSMUST00000158685 110 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm17100-201ENSMUST00000168963 272 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm20462-201ENSMUST00000172623 408 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.58□□□□□ -2.16
Cd40lgP27548 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.58□□□□□ -2.16
Cd40lgP27548 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm22683-201ENSMUST00000082854 137 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm23242-201ENSMUST00000083055 107 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm23731-201ENSMUST00000083749 107 ntBASIC1.58□□□□□ -2.16
Cd40lgP27548 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Cd40lgP27548 Gm25938-201ENSMUST00000104139 166 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm25421-201ENSMUST00000104218 164 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm42606-201ENSMUST00000114209 239 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm13729-201ENSMUST00000120328 406 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm24598-201ENSMUST00000122510 74 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm6956-201ENSMUST00000134724 546 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm25827-201ENSMUST00000157089 107 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm23120-201ENSMUST00000157654 287 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm16038-201ENSMUST00000159317 193 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm20613-201ENSMUST00000175828 345 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm27265-201ENSMUST00000183559 77 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm43238-201ENSMUST00000196463 359 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.57□□□□□ -2.16
Cd40lgP27548 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.57□□□□□ -2.16
Cd40lgP27548 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.56□□□□□ -2.16
Cd40lgP27548 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Cd40lgP27548 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Cd40lgP27548 Gm13432-201ENSMUST00000118861 241 ntBASIC1.56□□□□□ -2.16
Cd40lgP27548 Gm24478-201ENSMUST00000157439 158 ntBASIC1.56□□□□□ -2.16
Cd40lgP27548 Gm22556-201ENSMUST00000157803 100 ntBASIC1.56□□□□□ -2.16
Cd40lgP27548 Gm26024-201ENSMUST00000158657 322 ntBASIC1.56□□□□□ -2.16
Cd40lgP27548 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.56□□□□□ -2.16
Cd40lgP27548 Gm29005-201ENSMUST00000186773 320 ntBASIC1.56□□□□□ -2.16
Cd40lgP27548 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.56□□□□□ -2.16
Cd40lgP27548 Gm37399-201ENSMUST00000195224 416 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms