Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
P20040 Gm20102-201ENSMUST00000222445 220 ntBASIC1.43□□□□□ -2.18
P20040 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.43□□□□□ -2.18
P20040 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
P20040 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
P20040 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.42□□□□□ -2.18
P20040 Gm22761-201ENSMUST00000102278 96 ntBASIC1.42□□□□□ -2.18
P20040 Mir374b-201ENSMUST00000102314 95 ntBASIC1.42□□□□□ -2.18
P20040 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.42□□□□□ -2.18
P20040 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
P20040 Gm23169-201ENSMUST00000157157 112 ntBASIC1.42□□□□□ -2.18
P20040 Gm23022-201ENSMUST00000158768 180 ntBASIC1.42□□□□□ -2.18
P20040 Gm27539-201ENSMUST00000184971 224 ntBASIC1.42□□□□□ -2.18
P20040 Gm19901-201ENSMUST00000192191 495 ntBASIC1.42□□□□□ -2.18
P20040 Gm37128-201ENSMUST00000192599 232 ntBASIC1.42□□□□□ -2.18
P20040 Gm37054-201ENSMUST00000193481 543 ntBASIC1.42□□□□□ -2.18
P20040 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.42□□□□□ -2.18
P20040 Gm44962-201ENSMUST00000206460 279 ntBASIC1.42□□□□□ -2.18
P20040 Gm7495-201ENSMUST00000215099 426 ntBASIC1.42□□□□□ -2.18
P20040 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.42□□□□□ -2.18
P20040 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.42□□□□□ -2.18
P20040 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
P20040 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
P20040 Mir223-201ENSMUST00000102112 110 ntBASIC1.41□□□□□ -2.18
P20040 Gm23015-201ENSMUST00000104145 128 ntBASIC1.41□□□□□ -2.18
P20040 Gm15526-201ENSMUST00000112504 204 ntBASIC1.41□□□□□ -2.18
P20040 Gm13714-201ENSMUST00000117313 221 ntBASIC1.41□□□□□ -2.18
P20040 Gm12417-201ENSMUST00000119153 403 ntBASIC1.41□□□□□ -2.18
P20040 Gm6829-201ENSMUST00000119858 360 ntBASIC1.41□□□□□ -2.18
P20040 Gm15861-201ENSMUST00000120979 339 ntBASIC1.41□□□□□ -2.18
P20040 Gm27926-201ENSMUST00000157180 66 ntBASIC1.41□□□□□ -2.18
P20040 Gm24851-201ENSMUST00000158028 103 ntBASIC1.41□□□□□ -2.18
P20040 Gm27236-201ENSMUST00000184147 442 ntBASIC1.41□□□□□ -2.18
P20040 Mir8090-201ENSMUST00000185078 136 ntBASIC1.41□□□□□ -2.18
P20040 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.41□□□□□ -2.18
P20040 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.41□□□□□ -2.18
P20040 Mir148b-201ENSMUST00000083626 97 ntBASIC1.41□□□□□ -2.18
P20040 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
P20040 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
P20040 Gm26396-201ENSMUST00000104093 132 ntBASIC1.4□□□□□ -2.19
P20040 Gm13475-201ENSMUST00000119290 234 ntBASIC1.4□□□□□ -2.19
P20040 Gm22555-201ENSMUST00000157801 62 ntBASIC1.4□□□□□ -2.19
P20040 Gm24005-201ENSMUST00000158459 296 ntBASIC1.4□□□□□ -2.19
P20040 Gm21754-201ENSMUST00000177550 479 ntBASIC1.4□□□□□ -2.19
P20040 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
P20040 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
P20040 Mir7241-201ENSMUST00000184532 64 ntBASIC1.4□□□□□ -2.19
P20040 Gm45907-201ENSMUST00000213023 193 ntBASIC1.4□□□□□ -2.19
P20040 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.4□□□□□ -2.19
P20040 Gm25801-201ENSMUST00000082638 106 ntBASIC1.4□□□□□ -2.19
P20040 Gm24615-201ENSMUST00000083268 113 ntBASIC1.4□□□□□ -2.19
P20040 Gm23731-201ENSMUST00000083749 107 ntBASIC1.4□□□□□ -2.19
P20040 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
P20040 Gm12433-201ENSMUST00000119659 255 ntBASIC1.39□□□□□ -2.19
P20040 Gm11512-201ENSMUST00000119669 663 ntBASIC1.39□□□□□ -2.19
P20040 Gm6025-201ENSMUST00000121517 201 ntBASIC1.39□□□□□ -2.19
P20040 Gm26150-201ENSMUST00000157426 151 ntBASIC1.39□□□□□ -2.19
P20040 Gm22082-201ENSMUST00000157587 161 ntBASIC1.39□□□□□ -2.19
P20040 Gm23854-201ENSMUST00000158378 108 ntBASIC1.39□□□□□ -2.19
P20040 Gm26405-201ENSMUST00000158495 100 ntBASIC1.39□□□□□ -2.19
P20040 Gm26401-201ENSMUST00000158502 76 ntBASIC1.39□□□□□ -2.19
P20040 Gm24390-201ENSMUST00000179578 62 ntBASIC1.39□□□□□ -2.19
P20040 Gm28383-201ENSMUST00000187563 139 ntBASIC1.39□□□□□ -2.19
P20040 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
P20040 Gm29262-201ENSMUST00000190084 196 ntBASIC1.39□□□□□ -2.19
P20040 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.39□□□□□ -2.19
P20040 Gm43578-201ENSMUST00000201250 459 ntBASIC1.39□□□□□ -2.19
P20040 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
P20040 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.39□□□□□ -2.19
P20040 Snord68-201ENSMUST00000082516 86 ntBASIC1.39□□□□□ -2.19
P20040 Gm24262-201ENSMUST00000157431 144 ntBASIC1.38□□□□□ -2.19
P20040 Gm22556-201ENSMUST00000157803 100 ntBASIC1.38□□□□□ -2.19
P20040 Gm24222-201ENSMUST00000158834 93 ntBASIC1.38□□□□□ -2.19
P20040 Gm17100-201ENSMUST00000168963 272 ntBASIC1.38□□□□□ -2.19
P20040 Mir3057-201ENSMUST00000175040 91 ntBASIC1.38□□□□□ -2.19
P20040 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
P20040 Gm9156-201ENSMUST00000189660 463 ntBASIC1.38□□□□□ -2.19
P20040 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.38□□□□□ -2.19
P20040 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.38□□□□□ -2.19
P20040 Snord118-201ENSMUST00000082965 135 ntBASIC1.38□□□□□ -2.19
P20040 Gm25579-201ENSMUST00000083407 106 ntBASIC1.38□□□□□ -2.19
P20040 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.38□□□□□ -2.19
P20040 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
P20040 Mir301b-201ENSMUST00000102333 97 ntBASIC1.37□□□□□ -2.19
P20040 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
P20040 Gm23718-201ENSMUST00000157350 307 ntBASIC1.37□□□□□ -2.19
P20040 Gm22099-201ENSMUST00000157925 123 ntBASIC1.37□□□□□ -2.19
P20040 Gm22963-201ENSMUST00000157960 91 ntBASIC1.37□□□□□ -2.19
P20040 Gm25371-201ENSMUST00000158162 101 ntBASIC1.37□□□□□ -2.19
P20040 Rnu7-201ENSMUST00000158458 62 ntBASIC1.37□□□□□ -2.19
P20040 Gm24174-201ENSMUST00000158933 111 ntBASIC1.37□□□□□ -2.19
P20040 Gm23289-201ENSMUST00000175615 108 ntBASIC1.37□□□□□ -2.19
P20040 Gm37162-201ENSMUST00000191708 551 ntBASIC1.37□□□□□ -2.19
P20040 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
P20040 Gm26265-202ENSMUST00000196326 133 ntBASIC1.37□□□□□ -2.19
P20040 Gm43035-201ENSMUST00000197626 517 ntBASIC1.37□□□□□ -2.19
P20040 Gm45365-201ENSMUST00000209489 256 ntBASIC1.37□□□□□ -2.19
P20040 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.37□□□□□ -2.19
P20040 Gm24037-201ENSMUST00000082871 180 ntBASIC1.37□□□□□ -2.19
P20040 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms