Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm27592-201ENSMUST00000157729 126 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm22174-201ENSMUST00000175050 125 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm22692-201ENSMUST00000175055 125 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm27634-201ENSMUST00000175060 126 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm22460-201ENSMUST00000175269 124 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm25535-201ENSMUST00000175364 125 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm24365-201ENSMUST00000175384 125 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm44310-201ENSMUST00000175424 126 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm22639-201ENSMUST00000175591 125 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm25840-201ENSMUST00000177821 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm24952-201ENSMUST00000177909 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm23682-201ENSMUST00000178146 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm24652-201ENSMUST00000178223 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm22629-201ENSMUST00000178272 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm24021-201ENSMUST00000178435 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm22274-201ENSMUST00000178441 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm22050-201ENSMUST00000178442 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm23688-201ENSMUST00000178502 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm23944-201ENSMUST00000178607 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm26283-201ENSMUST00000178625 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm24979-201ENSMUST00000178626 126 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm25452-201ENSMUST00000178776 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm23286-201ENSMUST00000178963 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm22640-201ENSMUST00000179035 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm25984-201ENSMUST00000179129 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm25585-201ENSMUST00000179469 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm26374-201ENSMUST00000179737 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm24040-201ENSMUST00000179786 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm25017-201ENSMUST00000179805 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm23618-201ENSMUST00000179912 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm25253-201ENSMUST00000179958 107 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm26284-201ENSMUST00000180107 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm24570-201ENSMUST00000180314 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm24654-201ENSMUST00000180315 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm27743-201ENSMUST00000185136 126 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm37545-201ENSMUST00000186512 148 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm34779-201ENSMUST00000210036 263 ntBASIC3.59□□□□□ -1.83
RaraP11416 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.59□□□□□ -1.83
RaraP11416 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.59□□□□□ -1.83
RaraP11416 Mir186-201ENSMUST00000083497 71 ntBASIC3.59□□□□□ -1.83
RaraP11416 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RaraP11416 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RaraP11416 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
RaraP11416 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
RaraP11416 Gm12025-201ENSMUST00000117768 144 ntBASIC3.58□□□□□ -1.84
RaraP11416 Gm24926-201ENSMUST00000178053 79 ntBASIC3.58□□□□□ -1.84
RaraP11416 Gm22632-201ENSMUST00000178266 79 ntBASIC3.58□□□□□ -1.84
RaraP11416 Gm15235-201ENSMUST00000200572 194 ntBASIC3.58□□□□□ -1.84
RaraP11416 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RaraP11416 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RaraP11416 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RaraP11416 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RaraP11416 Gm25833-201ENSMUST00000104137 133 ntBASIC3.57□□□□□ -1.84
RaraP11416 Gm22590-201ENSMUST00000104247 128 ntBASIC3.57□□□□□ -1.84
RaraP11416 Gm12723-201ENSMUST00000120700 451 ntBASIC3.57□□□□□ -1.84
RaraP11416 Gm25980-201ENSMUST00000157176 218 ntBASIC3.57□□□□□ -1.84
RaraP11416 Gm28002-201ENSMUST00000184832 100 ntBASIC3.57□□□□□ -1.84
RaraP11416 Mir3969-201ENSMUST00000197106 92 ntBASIC3.57□□□□□ -1.84
RaraP11416 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.57□□□□□ -1.84
RaraP11416 Gm43587-201ENSMUST00000199590 204 ntBASIC3.57□□□□□ -1.84
RaraP11416 Gm44564-201ENSMUST00000207985 180 ntBASIC3.57□□□□□ -1.84
RaraP11416 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.57□□□□□ -1.84
RaraP11416 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RaraP11416 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.57□□□□□ -1.84
RaraP11416 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RaraP11416 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.57□□□□□ -1.84
RaraP11416 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RaraP11416 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RaraP11416 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.56□□□□□ -1.84
RaraP11416 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RaraP11416 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.56□□□□□ -1.84
RaraP11416 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RaraP11416 Gm14626-201ENSMUST00000117619 216 ntBASIC3.56□□□□□ -1.84
RaraP11416 Gm15365-201ENSMUST00000122392 300 ntBASIC3.56□□□□□ -1.84
RaraP11416 Gm22527-201ENSMUST00000158816 106 ntBASIC3.56□□□□□ -1.84
RaraP11416 Mir6385-201ENSMUST00000184295 105 ntBASIC3.56□□□□□ -1.84
RaraP11416 Mir6993-201ENSMUST00000184912 65 ntBASIC3.56□□□□□ -1.84
RaraP11416 Gm38298-201ENSMUST00000193578 118 ntBASIC3.56□□□□□ -1.84
RaraP11416 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.56□□□□□ -1.84
RaraP11416 Gm25589-201ENSMUST00000082502 166 ntBASIC3.56□□□□□ -1.84
RaraP11416 Gm24461-201ENSMUST00000082735 103 ntBASIC3.56□□□□□ -1.84
RaraP11416 AF357341-201ENSMUST00000083088 75 ntBASIC3.56□□□□□ -1.84
RaraP11416 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RaraP11416 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RaraP11416 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RaraP11416 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RaraP11416 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.55□□□□□ -1.84
RaraP11416 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RaraP11416 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RaraP11416 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RaraP11416 Gm24376-201ENSMUST00000104399 127 ntBASIC3.55□□□□□ -1.84
RaraP11416 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.55□□□□□ -1.84
RaraP11416 Gm24936-201ENSMUST00000122598 247 ntBASIC3.55□□□□□ -1.84
RaraP11416 Gm24314-201ENSMUST00000158274 123 ntBASIC3.55□□□□□ -1.84
RaraP11416 Gm26160-201ENSMUST00000158965 63 ntBASIC3.55□□□□□ -1.84
RaraP11416 Gm23933-201ENSMUST00000178405 79 ntBASIC3.55□□□□□ -1.84
RaraP11416 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.55□□□□□ -1.84
RaraP11416 Gm27773-201ENSMUST00000184087 78 ntBASIC3.55□□□□□ -1.84
RaraP11416 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.55□□□□□ -1.84
RaraP11416 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms