Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.68□□□□□ -2.14
Lire1P11260 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Lire1P11260 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.68□□□□□ -2.14
Lire1P11260 Gm23766-201ENSMUST00000103894 80 ntBASIC1.67□□□□□ -2.14
Lire1P11260 Gm22308-201ENSMUST00000177609 107 ntBASIC1.67□□□□□ -2.14
Lire1P11260 Gm25121-201ENSMUST00000179846 79 ntBASIC1.67□□□□□ -2.14
Lire1P11260 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.67□□□□□ -2.14
Lire1P11260 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.67□□□□□ -2.14
Lire1P11260 Gm19441-201ENSMUST00000221545 330 ntBASIC1.67□□□□□ -2.14
Lire1P11260 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.67□□□□□ -2.14
Lire1P11260 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.67□□□□□ -2.14
Lire1P11260 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.66□□□□□ -2.14
Lire1P11260 Gm15162-201ENSMUST00000119325 283 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Gm22559-201ENSMUST00000157329 134 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Gm24409-201ENSMUST00000157881 152 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Gm22841-201ENSMUST00000158443 62 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Gm26435-201ENSMUST00000179026 107 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Gm29037-201ENSMUST00000189092 313 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Lire1P11260 Gm43723-201ENSMUST00000196886 189 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.66□□□□□ -2.14
Lire1P11260 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.66□□□□□ -2.14
Lire1P11260 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.66□□□□□ -2.14
Lire1P11260 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.66□□□□□ -2.14
Lire1P11260 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.65□□□□□ -2.14
Lire1P11260 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.65□□□□□ -2.15
Lire1P11260 Gm24726-201ENSMUST00000158232 121 ntBASIC1.65□□□□□ -2.15
Lire1P11260 Gm25491-201ENSMUST00000158733 308 ntBASIC1.65□□□□□ -2.15
Lire1P11260 Mir7679-201ENSMUST00000183379 63 ntBASIC1.65□□□□□ -2.15
Lire1P11260 Gm23370-201ENSMUST00000199545 130 ntBASIC1.65□□□□□ -2.15
Lire1P11260 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.65□□□□□ -2.15
Lire1P11260 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Lire1P11260 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.64□□□□□ -2.15
Lire1P11260 Gm15529-201ENSMUST00000121833 994 ntBASIC1.64□□□□□ -2.15
Lire1P11260 Gm14364-201ENSMUST00000129209 267 ntBASIC1.64□□□□□ -2.15
Lire1P11260 Gm24478-201ENSMUST00000157439 158 ntBASIC1.64□□□□□ -2.15
Lire1P11260 Gm27421-201ENSMUST00000184729 167 ntBASIC1.64□□□□□ -2.15
Lire1P11260 Gm18185-201ENSMUST00000186725 667 ntBASIC1.64□□□□□ -2.15
Lire1P11260 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.64□□□□□ -2.15
Lire1P11260 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.64□□□□□ -2.15
Lire1P11260 Gm23245-201ENSMUST00000083370 135 ntBASIC1.64□□□□□ -2.15
Lire1P11260 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Lire1P11260 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Lire1P11260 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Lire1P11260 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Lire1P11260 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Lire1P11260 Mir293-201ENSMUST00000104841 80 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm14766-201ENSMUST00000121689 367 ntBASIC1.63□□□□□ -2.15
Lire1P11260 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Mir6351-201ENSMUST00000183826 99 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28110-201ENSMUST00000185782 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm29057-201ENSMUST00000186468 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28737-201ENSMUST00000186808 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm29147-201ENSMUST00000186846 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm29118-201ENSMUST00000186908 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28433-201ENSMUST00000187085 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm29227-201ENSMUST00000187139 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28759-201ENSMUST00000187621 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28831-201ENSMUST00000187739 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28200-201ENSMUST00000187778 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm29034-201ENSMUST00000188099 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28752-201ENSMUST00000188340 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm29378-201ENSMUST00000188723 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28569-201ENSMUST00000188748 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28120-201ENSMUST00000188812 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28369-201ENSMUST00000188993 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28537-201ENSMUST00000189026 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28909-201ENSMUST00000189406 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28861-201ENSMUST00000189681 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28506-201ENSMUST00000189937 150 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28717-201ENSMUST00000189950 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28848-201ENSMUST00000189984 168 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm29180-201ENSMUST00000190003 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm29575-201ENSMUST00000190597 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm29631-201ENSMUST00000191065 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm28160-201ENSMUST00000191229 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm29469-201ENSMUST00000191448 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm37129-201ENSMUST00000195791 315 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Gm34139-201ENSMUST00000196166 294 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.63□□□□□ -2.15
Lire1P11260 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.63□□□□□ -2.15
Lire1P11260 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.63□□□□□ -2.15
Lire1P11260 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.63□□□□□ -2.15
Lire1P11260 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Lire1P11260 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Lire1P11260 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Lire1P11260 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.62□□□□□ -2.15
Lire1P11260 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.62□□□□□ -2.15
Lire1P11260 Gm24632-201ENSMUST00000122770 323 ntBASIC1.62□□□□□ -2.15
Lire1P11260 Mir7j-201ENSMUST00000184427 122 ntBASIC1.62□□□□□ -2.15
Lire1P11260 Gm19901-201ENSMUST00000192191 495 ntBASIC1.62□□□□□ -2.15
Lire1P11260 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.62□□□□□ -2.15
Lire1P11260 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.62□□□□□ -2.15
Lire1P11260 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.62□□□□□ -2.15
Lire1P11260 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.62□□□□□ -2.15
Lire1P11260 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms