| Hoxd4 | P10628 | Gm21034-201 | ENSMUST00000207390 | 2608 nt | BASIC | 2.9 | □□□□□ -1.94 | | |
| Hoxd4 | P10628 | Cp-202 | ENSMUST00000091309 | 4029 nt | APPRIS P3 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.94 | | |
| Hoxd4 | P10628 | Vmn1r51-205 | ENSMUST00000227109 | 4214 nt | APPRIS P1 BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22004-201 | ENSMUST00000101884 | 107 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm12897-201 | ENSMUST00000120341 | 250 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm14402-201 | ENSMUST00000122217 | 508 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25060-201 | ENSMUST00000157374 | 130 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22380-201 | ENSMUST00000157479 | 95 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm23865-201 | ENSMUST00000157723 | 97 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm23666-201 | ENSMUST00000158053 | 116 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25977-201 | ENSMUST00000158697 | 85 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25464-201 | ENSMUST00000175481 | 107 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25098-201 | ENSMUST00000177580 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm23356-201 | ENSMUST00000177610 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24027-201 | ENSMUST00000177611 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22511-201 | ENSMUST00000177628 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22630-201 | ENSMUST00000177781 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm23560-201 | ENSMUST00000177782 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25462-201 | ENSMUST00000177833 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm26059-201 | ENSMUST00000177865 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22255-201 | ENSMUST00000177933 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25146-201 | ENSMUST00000177976 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25523-201 | ENSMUST00000178044 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24585-201 | ENSMUST00000178104 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22627-201 | ENSMUST00000178127 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22912-201 | ENSMUST00000178242 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24866-201 | ENSMUST00000178338 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22524-201 | ENSMUST00000178357 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25710-201 | ENSMUST00000178367 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm23575-201 | ENSMUST00000178406 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24872-201 | ENSMUST00000178434 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22449-201 | ENSMUST00000178924 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24702-201 | ENSMUST00000178965 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24206-201 | ENSMUST00000179011 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24528-201 | ENSMUST00000179164 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22909-201 | ENSMUST00000179190 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm26334-201 | ENSMUST00000179403 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25463-201 | ENSMUST00000179405 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25742-201 | ENSMUST00000179530 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25209-201 | ENSMUST00000179576 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm26392-201 | ENSMUST00000179661 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25230-201 | ENSMUST00000179740 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm26434-201 | ENSMUST00000179778 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25741-201 | ENSMUST00000179825 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24759-201 | ENSMUST00000179827 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24219-201 | ENSMUST00000179861 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm27308-201 | ENSMUST00000184807 | 233 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm29613-201 | ENSMUST00000185846 | 313 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm29544-201 | ENSMUST00000188860 | 313 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm28808-201 | ENSMUST00000190978 | 313 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm37104-201 | ENSMUST00000193278 | 196 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm23370-202 | ENSMUST00000197008 | 129 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm43680-201 | ENSMUST00000199466 | 340 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm45687-201 | ENSMUST00000209454 | 155 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm39147-201 | ENSMUST00000211376 | 465 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | AC132465.3-201 | ENSMUST00000219326 | 195 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | AC154262.1-201 | ENSMUST00000225976 | 286 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | AC124104.1-201 | ENSMUST00000226279 | 417 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Rps17-201 | ENSMUST00000080813 | 494 nt | APPRIS P1 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25142-201 | ENSMUST00000082698 | 107 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm23254-201 | ENSMUST00000097244 | 79 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Ctdspl2-202 | ENSMUST00000110572 | 4160 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Olfr1256-203 | ENSMUST00000213833 | 6081 nt | APPRIS P1 TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Zbtb41-201 | ENSMUST00000039867 | 8361 nt | APPRIS P1 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm5141-202 | ENSMUST00000201047 | 3279 nt | APPRIS P1 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24127-201 | ENSMUST00000104110 | 130 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm24283-201 | ENSMUST00000104233 | 107 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm2042-201 | ENSMUST00000110145 | 1894 nt | APPRIS P3 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Dmd-203 | ENSMUST00000114000 | 14910 nt | APPRIS P1 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm11253-201 | ENSMUST00000118486 | 201 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm6952-201 | ENSMUST00000118629 | 159 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm12510-201 | ENSMUST00000152190 | 362 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22961-201 | ENSMUST00000157964 | 106 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm29452-201 | ENSMUST00000187996 | 313 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | 1700112D23Rik-202 | ENSMUST00000193387 | 299 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm34139-201 | ENSMUST00000196166 | 294 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | CT009748.1-201 | ENSMUST00000216068 | 269 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm31025-201 | ENSMUST00000222553 | 482 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | AC166113.1-201 | ENSMUST00000225258 | 475 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Defb19-201 | ENSMUST00000053180 | 394 nt | APPRIS P1 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22245-201 | ENSMUST00000082479 | 103 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25205-201 | ENSMUST00000082841 | 103 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Olfr1402-202 | ENSMUST00000199297 | 4051 nt | APPRIS P1 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm38031-201 | ENSMUST00000191819 | 3015 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Fam81b-201 | ENSMUST00000208418 | 2760 nt | APPRIS P1 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Olfr1168-202 | ENSMUST00000215996 | 2322 nt | APPRIS P1 TSL 3 BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm43404-201 | ENSMUST00000200424 | 2534 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm19541-201 | ENSMUST00000184488 | 2868 nt | TSL 1 (best) BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm37061-201 | ENSMUST00000195066 | 3243 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22105-201 | ENSMUST00000116734 | 116 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm12443-201 | ENSMUST00000122308 | 323 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22490-201 | ENSMUST00000157188 | 119 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm22310-201 | ENSMUST00000157509 | 116 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm23755-201 | ENSMUST00000157578 | 343 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm17161-201 | ENSMUST00000169187 | 524 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm25646-201 | ENSMUST00000178527 | 79 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm28010-201 | ENSMUST00000179485 | 126 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Mir8103-201 | ENSMUST00000183945 | 107 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Mir6405-201 | ENSMUST00000184584 | 124 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Hoxd4 | P10628 | Gm27520-201 | ENSMUST00000184872 | 81 nt | BASIC | 2.88 | □□□□□ -1.95 | | |