Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm22559-201ENSMUST00000157329 134 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Gm23967-201ENSMUST00000175062 78 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Gm24390-201ENSMUST00000179578 62 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Chmp6P0C0A3 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Gm44654-201ENSMUST00000208052 329 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Chmp6P0C0A3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Snord118-201ENSMUST00000082965 135 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Gm24615-201ENSMUST00000083268 113 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm23170-201ENSMUST00000157158 106 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm25914-201ENSMUST00000157618 153 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm24726-201ENSMUST00000158232 121 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm24229-201ENSMUST00000158830 118 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm11392-201ENSMUST00000181419 710 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm27957-201ENSMUST00000184054 127 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm9156-201ENSMUST00000189660 463 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm19901-201ENSMUST00000192191 495 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm7495-201ENSMUST00000215099 426 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm24536-201ENSMUST00000083144 107 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Mir221-201ENSMUST00000083488 95 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm26108-201ENSMUST00000083973 191 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Chmp6P0C0A3 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.39□□□□□ -2.19
Chmp6P0C0A3 Gm12255-201ENSMUST00000117184 284 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Gm12417-201ENSMUST00000119153 403 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Gm14937-201ENSMUST00000119709 208 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Gm23557-201ENSMUST00000157820 138 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Rnu7-201ENSMUST00000158458 62 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Gm18185-201ENSMUST00000186725 667 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Gm43035-201ENSMUST00000197626 517 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Gm25636-201ENSMUST00000082666 133 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.38□□□□□ -2.19
Chmp6P0C0A3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.38□□□□□ -2.19
Chmp6P0C0A3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Gm23656-201ENSMUST00000122626 112 ntBASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Gm22027-201ENSMUST00000122737 127 ntBASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Gm35736-201ENSMUST00000203681 313 ntBASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Chmp6P0C0A3 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.37□□□□□ -2.19
Chmp6P0C0A3 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.37□□□□□ -2.19
Chmp6P0C0A3 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Chmp6P0C0A3 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Gm25543-201ENSMUST00000122678 312 ntBASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Gm25371-201ENSMUST00000158162 101 ntBASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Gm28995-201ENSMUST00000186625 261 ntBASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Gm26066-201ENSMUST00000083385 109 ntBASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.36□□□□□ -2.19
Chmp6P0C0A3 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Gm25068-201ENSMUST00000103895 110 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Gm25495-201ENSMUST00000104431 131 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Gm11857-201ENSMUST00000119817 324 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Gm25423-201ENSMUST00000157609 107 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Gm24409-201ENSMUST00000157881 152 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Gm23208-201ENSMUST00000158666 127 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Gm18588-201ENSMUST00000177308 492 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Gm44483-201ENSMUST00000197203 97 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.35□□□□□ -2.19
Chmp6P0C0A3 Gm23515-201ENSMUST00000082829 107 ntBASIC1.35□□□□□ -2.19
Chmp6P0C0A3 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Gm25759-201ENSMUST00000103988 129 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Gm24577-201ENSMUST00000158580 63 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Mir3098-201ENSMUST00000175416 87 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Gm25121-201ENSMUST00000179846 79 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Gm27326-201ENSMUST00000183504 95 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Gm27919-201ENSMUST00000185163 107 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Gm28912-201ENSMUST00000189001 234 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Gm29037-201ENSMUST00000189092 313 ntBASIC1.34□□□□□ -2.19
Chmp6P0C0A3 Gm28648-201ENSMUST00000190092 343 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms