Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Hoxd3P09027 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Hoxd3P09027 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hoxd3P09027 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hoxd3P09027 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.11□□□□□ -1.91
Hoxd3P09027 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hoxd3P09027 Gm23271-201ENSMUST00000104052 124 ntBASIC3.11□□□□□ -1.91
Hoxd3P09027 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.11□□□□□ -1.91
Hoxd3P09027 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.11□□□□□ -1.91
Hoxd3P09027 Gm16327-201ENSMUST00000137146 228 ntBASIC3.11□□□□□ -1.91
Hoxd3P09027 Gm16533-201ENSMUST00000140035 228 ntBASIC3.11□□□□□ -1.91
Hoxd3P09027 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hoxd3P09027 Gm23816-201ENSMUST00000179617 132 ntBASIC3.11□□□□□ -1.91
Hoxd3P09027 Gm27580-201ENSMUST00000183666 149 ntBASIC3.11□□□□□ -1.91
Hoxd3P09027 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Hoxd3P09027 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.11□□□□□ -1.91
Hoxd3P09027 Gm45429-201ENSMUST00000209527 172 ntBASIC3.11□□□□□ -1.91
Hoxd3P09027 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.11□□□□□ -1.91
Hoxd3P09027 Gm26265-201ENSMUST00000083277 135 ntBASIC3.11□□□□□ -1.91
Hoxd3P09027 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hoxd3P09027 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hoxd3P09027 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hoxd3P09027 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Hoxd3P09027 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Hoxd3P09027 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Hoxd3P09027 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.1□□□□□ -1.91
Hoxd3P09027 Gm24468-201ENSMUST00000104489 104 ntBASIC3.1□□□□□ -1.91
Hoxd3P09027 Gm13268-201ENSMUST00000117485 433 ntBASIC3.1□□□□□ -1.91
Hoxd3P09027 Gm14282-201ENSMUST00000119484 240 ntBASIC3.1□□□□□ -1.91
Hoxd3P09027 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.1□□□□□ -1.91
Hoxd3P09027 Gm22079-201ENSMUST00000157592 106 ntBASIC3.1□□□□□ -1.91
Hoxd3P09027 Gm24905-201ENSMUST00000158129 104 ntBASIC3.1□□□□□ -1.91
Hoxd3P09027 Mir5136-201ENSMUST00000175573 76 ntBASIC3.1□□□□□ -1.91
Hoxd3P09027 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.1□□□□□ -1.91
Hoxd3P09027 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.1□□□□□ -1.91
Hoxd3P09027 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Hoxd3P09027 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Hoxd3P09027 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Hoxd3P09027 Gm13737-201ENSMUST00000119793 232 ntBASIC3.09□□□□□ -1.91
Hoxd3P09027 Gm23755-201ENSMUST00000157578 343 ntBASIC3.09□□□□□ -1.91
Hoxd3P09027 Snord11-201ENSMUST00000158468 84 ntBASIC3.09□□□□□ -1.91
Hoxd3P09027 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.09□□□□□ -1.91
Hoxd3P09027 Gm23723-201ENSMUST00000082996 132 ntBASIC3.09□□□□□ -1.91
Hoxd3P09027 Mir370-201ENSMUST00000083499 79 ntBASIC3.09□□□□□ -1.91
Hoxd3P09027 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.09□□□□□ -1.91
Hoxd3P09027 Mir28a-201ENSMUST00000083560 86 ntBASIC3.09□□□□□ -1.91
Hoxd3P09027 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.09□□□□□ -1.91
Hoxd3P09027 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Hoxd3P09027 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Hoxd3P09027 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Hoxd3P09027 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Hoxd3P09027 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Hoxd3P09027 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Hoxd3P09027 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hoxd3P09027 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Hoxd3P09027 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Hoxd3P09027 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hoxd3P09027 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Hoxd3P09027 Gm24318-201ENSMUST00000104490 131 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 Mir466l-201ENSMUST00000104866 121 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 Gm24898-201ENSMUST00000158133 106 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 Gm10357-201ENSMUST00000159886 264 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 Gm23152-201ENSMUST00000175322 116 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 Gm10067-201ENSMUST00000179462 348 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 Gm4248-201ENSMUST00000196905 316 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.08□□□□□ -1.92
Hoxd3P09027 Gm17829-201ENSMUST00000219782 344 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 Gm25130-201ENSMUST00000082650 156 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 Mir132-201ENSMUST00000083603 66 ntBASIC3.08□□□□□ -1.92
Hoxd3P09027 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.08□□□□□ -1.92
Hoxd3P09027 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hoxd3P09027 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hoxd3P09027 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
Hoxd3P09027 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hoxd3P09027 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.07□□□□□ -1.92
Hoxd3P09027 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Hoxd3P09027 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hoxd3P09027 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Hoxd3P09027 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hoxd3P09027 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Hoxd3P09027 Gm23654-201ENSMUST00000116758 126 ntBASIC3.07□□□□□ -1.92
Hoxd3P09027 Gm14946-201ENSMUST00000119859 296 ntBASIC3.07□□□□□ -1.92
Hoxd3P09027 Gm24811-201ENSMUST00000175313 100 ntBASIC3.07□□□□□ -1.92
Hoxd3P09027 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hoxd3P09027 Gm28270-201ENSMUST00000188550 109 ntBASIC3.07□□□□□ -1.92
Hoxd3P09027 Gm28328-201ENSMUST00000188869 109 ntBASIC3.07□□□□□ -1.92
Hoxd3P09027 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.07□□□□□ -1.92
Hoxd3P09027 Gm45796-201ENSMUST00000212483 114 ntBASIC3.07□□□□□ -1.92
Hoxd3P09027 Gm23247-201ENSMUST00000083373 107 ntBASIC3.07□□□□□ -1.92
Hoxd3P09027 Gm23040-201ENSMUST00000083869 163 ntBASIC3.07□□□□□ -1.92
Hoxd3P09027 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hoxd3P09027 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hoxd3P09027 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hoxd3P09027 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Hoxd3P09027 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Hoxd3P09027 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Hoxd3P09027 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 357 ms