Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Gm24079-201ENSMUST00000104352 132 ntBASIC2.16□□□□□ -2.06
NefmP08553 Gm26150-201ENSMUST00000157426 151 ntBASIC2.16□□□□□ -2.06
NefmP08553 Gm24394-201ENSMUST00000158141 123 ntBASIC2.16□□□□□ -2.06
NefmP08553 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.16□□□□□ -2.06
NefmP08553 Gm22308-201ENSMUST00000177609 107 ntBASIC2.16□□□□□ -2.06
NefmP08553 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.16□□□□□ -2.06
NefmP08553 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NefmP08553 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.16□□□□□ -2.06
NefmP08553 Gm22555-201ENSMUST00000157801 62 ntBASIC2.15□□□□□ -2.07
NefmP08553 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.15□□□□□ -2.07
NefmP08553 Gm45296-201ENSMUST00000209625 205 ntBASIC2.15□□□□□ -2.07
NefmP08553 Gm45907-201ENSMUST00000213023 193 ntBASIC2.15□□□□□ -2.07
NefmP08553 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.15□□□□□ -2.07
NefmP08553 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.15□□□□□ -2.07
NefmP08553 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.15□□□□□ -2.07
NefmP08553 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.15□□□□□ -2.07
NefmP08553 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
NefmP08553 Gm11359-201ENSMUST00000120039 567 ntBASIC2.14□□□□□ -2.07
NefmP08553 Gm6956-201ENSMUST00000134724 546 ntBASIC2.14□□□□□ -2.07
NefmP08553 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.14□□□□□ -2.07
NefmP08553 Gm22221-201ENSMUST00000157362 103 ntBASIC2.14□□□□□ -2.07
NefmP08553 Mir7225-201ENSMUST00000184178 54 ntBASIC2.14□□□□□ -2.07
NefmP08553 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.14□□□□□ -2.07
NefmP08553 Mir1291-201ENSMUST00000199842 117 ntBASIC2.14□□□□□ -2.07
NefmP08553 Gm44429-201ENSMUST00000203542 186 ntBASIC2.14□□□□□ -2.07
NefmP08553 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.14□□□□□ -2.07
NefmP08553 AC110380.1-201ENSMUST00000226987 389 ntBASIC2.14□□□□□ -2.07
NefmP08553 Snora34-201ENSMUST00000083402 138 ntBASIC2.14□□□□□ -2.07
NefmP08553 Mir320-201ENSMUST00000083594 82 ntBASIC2.14□□□□□ -2.07
NefmP08553 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.14□□□□□ -2.07
NefmP08553 Snord98-201ENSMUST00000116819 65 ntBASIC2.13□□□□□ -2.07
NefmP08553 Gm14269-201ENSMUST00000120455 306 ntBASIC2.13□□□□□ -2.07
NefmP08553 Gm23718-201ENSMUST00000157350 307 ntBASIC2.13□□□□□ -2.07
NefmP08553 Gm23670-201ENSMUST00000157469 119 ntBASIC2.13□□□□□ -2.07
NefmP08553 Gm24348-201ENSMUST00000158710 130 ntBASIC2.13□□□□□ -2.07
NefmP08553 Gm22136-201ENSMUST00000158751 268 ntBASIC2.13□□□□□ -2.07
NefmP08553 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.13□□□□□ -2.07
NefmP08553 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.13□□□□□ -2.07
NefmP08553 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.13□□□□□ -2.07
NefmP08553 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.13□□□□□ -2.07
NefmP08553 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.13□□□□□ -2.07
NefmP08553 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.13□□□□□ -2.07
NefmP08553 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.13□□□□□ -2.07
NefmP08553 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.13□□□□□ -2.07
NefmP08553 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.13□□□□□ -2.07
NefmP08553 Gm22263-201ENSMUST00000180060 104 ntBASIC2.13□□□□□ -2.07
NefmP08553 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NefmP08553 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.13□□□□□ -2.07
NefmP08553 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.13□□□□□ -2.07
NefmP08553 Gm46312-201ENSMUST00000220961 420 ntBASIC2.13□□□□□ -2.07
NefmP08553 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.13□□□□□ -2.07
NefmP08553 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NefmP08553 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
NefmP08553 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.12□□□□□ -2.07
NefmP08553 Gm23011-201ENSMUST00000104148 132 ntBASIC2.12□□□□□ -2.07
NefmP08553 Gm12351-201ENSMUST00000118727 292 ntBASIC2.12□□□□□ -2.07
NefmP08553 Gm27926-201ENSMUST00000157180 66 ntBASIC2.12□□□□□ -2.07
NefmP08553 Snord13-201ENSMUST00000157627 104 ntBASIC2.12□□□□□ -2.07
NefmP08553 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.12□□□□□ -2.07
NefmP08553 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NefmP08553 Gm44726-201ENSMUST00000203427 217 ntBASIC2.12□□□□□ -2.07
NefmP08553 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.12□□□□□ -2.07
NefmP08553 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.12□□□□□ -2.07
NefmP08553 Gm24536-201ENSMUST00000083144 107 ntBASIC2.12□□□□□ -2.07
NefmP08553 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NefmP08553 Gm6025-201ENSMUST00000121517 201 ntBASIC2.11□□□□□ -2.07
NefmP08553 Gm23558-201ENSMUST00000157823 80 ntBASIC2.11□□□□□ -2.07
NefmP08553 Gm16038-201ENSMUST00000159317 193 ntBASIC2.11□□□□□ -2.07
NefmP08553 Gm38041-201ENSMUST00000194445 661 ntBASIC2.11□□□□□ -2.07
NefmP08553 Gm33866-201ENSMUST00000196911 289 ntBASIC2.11□□□□□ -2.07
NefmP08553 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.11□□□□□ -2.07
NefmP08553 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.11□□□□□ -2.07
NefmP08553 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.11□□□□□ -2.07
NefmP08553 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.1□□□□□ -2.07
NefmP08553 Mir701-201ENSMUST00000102208 109 ntBASIC2.1□□□□□ -2.07
NefmP08553 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NefmP08553 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NefmP08553 Gm25486-201ENSMUST00000158726 63 ntBASIC2.1□□□□□ -2.07
NefmP08553 Gm20438-201ENSMUST00000174441 329 ntBASIC2.1□□□□□ -2.07
NefmP08553 Mir3569-201ENSMUST00000185080 58 ntBASIC2.1□□□□□ -2.07
NefmP08553 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NefmP08553 Gm20102-201ENSMUST00000222445 220 ntBASIC2.1□□□□□ -2.07
NefmP08553 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NefmP08553 Gm25801-201ENSMUST00000082638 106 ntBASIC2.1□□□□□ -2.07
NefmP08553 Gm24037-201ENSMUST00000082871 180 ntBASIC2.1□□□□□ -2.07
NefmP08553 Snord118-201ENSMUST00000082965 135 ntBASIC2.1□□□□□ -2.07
NefmP08553 Gm26314-201ENSMUST00000083891 107 ntBASIC2.1□□□□□ -2.07
NefmP08553 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.1□□□□□ -2.07
NefmP08553 Gm23230-201ENSMUST00000157298 133 ntBASIC2.09□□□□□ -2.07
NefmP08553 Gm24726-201ENSMUST00000158232 121 ntBASIC2.09□□□□□ -2.07
NefmP08553 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.09□□□□□ -2.07
NefmP08553 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
NefmP08553 Gm25121-201ENSMUST00000179846 79 ntBASIC2.09□□□□□ -2.07
NefmP08553 Gm28489-201ENSMUST00000186655 316 ntBASIC2.09□□□□□ -2.07
NefmP08553 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.09□□□□□ -2.07
NefmP08553 Gm43427-201ENSMUST00000198188 331 ntBASIC2.09□□□□□ -2.07
NefmP08553 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC2.09□□□□□ -2.07
NefmP08553 Gm45403-201ENSMUST00000209453 276 ntBASIC2.09□□□□□ -2.07
NefmP08553 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.09□□□□□ -2.07
NefmP08553 Gm15443-201ENSMUST00000118947 820 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms