Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm20257-202ENSMUST00000188643 130 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm29657-201ENSMUST00000189807 342 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm19123-201ENSMUST00000190716 651 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm37763-201ENSMUST00000193445 120 ntBASIC2.54□□□□□ -2
Col3a1P08121 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.54□□□□□ -2
Col3a1P08121 Mir7661-201ENSMUST00000197023 61 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm43402-201ENSMUST00000197159 159 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm45315-201ENSMUST00000209283 333 ntBASIC2.54□□□□□ -2
Col3a1P08121 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm25081-201ENSMUST00000082534 108 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm22704-201ENSMUST00000083027 137 ntBASIC2.54□□□□□ -2
Col3a1P08121 Snora69-201ENSMUST00000083708 131 ntBASIC2.54□□□□□ -2
Col3a1P08121 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col3a1P08121 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col3a1P08121 Gm24605-201ENSMUST00000104772 96 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm26479-201ENSMUST00000122620 106 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm25621-201ENSMUST00000157223 114 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm24475-201ENSMUST00000157435 143 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm26186-201ENSMUST00000157689 125 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm22113-201ENSMUST00000158343 104 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm26287-201ENSMUST00000158887 81 ntBASIC2.53□□□□□ -2
Col3a1P08121 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm22308-201ENSMUST00000177609 107 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm25450-201ENSMUST00000179144 107 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm27470-201ENSMUST00000184070 210 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm6651-201ENSMUST00000189471 271 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm45380-201ENSMUST00000210465 315 ntBASIC2.53□□□□□ -2
Col3a1P08121 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.53□□□□□ -2
Col3a1P08121 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.53□□□□□ -2
Col3a1P08121 Gm22723-201ENSMUST00000083820 129 ntBASIC2.53□□□□□ -2
Col3a1P08121 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.53□□□□□ -2
Col3a1P08121 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Col3a1P08121 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Col3a1P08121 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.53□□□□□ -2.01
Col3a1P08121 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col3a1P08121 Gm15029-201ENSMUST00000119742 199 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm25783-201ENSMUST00000122525 190 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm16328-201ENSMUST00000126985 196 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm5958-201ENSMUST00000147698 297 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm23474-201ENSMUST00000158884 75 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col3a1P08121 Gm20534-201ENSMUST00000172957 172 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm24106-201ENSMUST00000175498 127 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm24487-201ENSMUST00000178017 63 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm27580-201ENSMUST00000183666 149 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm28627-201ENSMUST00000186141 453 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm37997-201ENSMUST00000193515 267 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Mir3535-201ENSMUST00000197651 147 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col3a1P08121 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.52□□□□□ -2.01
Col3a1P08121 Gm23625-201ENSMUST00000082457 100 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Col3a1P08121 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col3a1P08121 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm12191-201ENSMUST00000118307 348 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm15760-201ENSMUST00000119553 283 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm9703-201ENSMUST00000119573 343 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm5937-201ENSMUST00000119715 643 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.52□□□□□ -2.01
Col3a1P08121 Gm26279-201ENSMUST00000157095 102 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm23232-201ENSMUST00000157300 105 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm25664-201ENSMUST00000157697 107 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm23209-201ENSMUST00000158667 110 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm25834-201ENSMUST00000158916 101 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm43583-201ENSMUST00000199235 303 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Gm9795-201ENSMUST00000062156 693 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.52□□□□□ -2.01
Col3a1P08121 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col3a1P08121 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col3a1P08121 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col3a1P08121 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Mir687-201ENSMUST00000102166 89 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Gm24951-201ENSMUST00000102182 109 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Gm26018-201ENSMUST00000104406 128 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Gm15037-201ENSMUST00000120358 259 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col3a1P08121 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col3a1P08121 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.51□□□□□ -2.01
Col3a1P08121 Gm44533-201ENSMUST00000207782 268 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Gm23041-201ENSMUST00000083868 106 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.51□□□□□ -2.01
Col3a1P08121 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Col3a1P08121 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Col3a1P08121 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col3a1P08121 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Col3a1P08121 Gm13457-201ENSMUST00000117885 267 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm13541-201ENSMUST00000119519 283 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm15223-201ENSMUST00000120989 826 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms