Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm43884-201ENSMUST00000204251 559 ntBASIC1.69□□□□□ -2.14
P06344 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.69□□□□□ -2.14
P06344 Mir29c-201ENSMUST00000083614 88 ntBASIC1.69□□□□□ -2.14
P06344 Mir496a-201ENSMUST00000093627 79 ntBASIC1.69□□□□□ -2.14
P06344 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
P06344 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
P06344 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
P06344 Mir872-201ENSMUST00000104728 81 ntBASIC1.68□□□□□ -2.14
P06344 Gm26249-201ENSMUST00000116708 118 ntBASIC1.68□□□□□ -2.14
P06344 Gm13432-201ENSMUST00000118861 241 ntBASIC1.68□□□□□ -2.14
P06344 Gm25113-201ENSMUST00000157185 143 ntBASIC1.68□□□□□ -2.14
P06344 Gm22554-201ENSMUST00000157798 147 ntBASIC1.68□□□□□ -2.14
P06344 Gm23043-201ENSMUST00000157890 109 ntBASIC1.68□□□□□ -2.14
P06344 Gm24348-201ENSMUST00000158710 130 ntBASIC1.68□□□□□ -2.14
P06344 Gm22011-201ENSMUST00000158790 123 ntBASIC1.68□□□□□ -2.14
P06344 Gm25368-201ENSMUST00000158847 131 ntBASIC1.68□□□□□ -2.14
P06344 Gm24177-201ENSMUST00000158927 131 ntBASIC1.68□□□□□ -2.14
P06344 Gm24308-201ENSMUST00000177773 114 ntBASIC1.68□□□□□ -2.14
P06344 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.68□□□□□ -2.14
P06344 Gm27979-201ENSMUST00000185126 56 ntBASIC1.68□□□□□ -2.14
P06344 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
P06344 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.68□□□□□ -2.14
P06344 Gm44654-201ENSMUST00000208052 329 ntBASIC1.68□□□□□ -2.14
P06344 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.68□□□□□ -2.14
P06344 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
P06344 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.68□□□□□ -2.14
P06344 Gm25788-201ENSMUST00000082721 131 ntBASIC1.68□□□□□ -2.14
P06344 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.68□□□□□ -2.14
P06344 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
P06344 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
P06344 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
P06344 Gm22032-201ENSMUST00000116946 116 ntBASIC1.67□□□□□ -2.14
P06344 Gm6829-201ENSMUST00000119858 360 ntBASIC1.67□□□□□ -2.14
P06344 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
P06344 Gm23048-201ENSMUST00000157237 129 ntBASIC1.67□□□□□ -2.14
P06344 Gm22085-201ENSMUST00000158344 110 ntBASIC1.67□□□□□ -2.14
P06344 Gm22836-201ENSMUST00000158441 61 ntBASIC1.67□□□□□ -2.14
P06344 Gm26400-201ENSMUST00000175012 85 ntBASIC1.67□□□□□ -2.14
P06344 Mir6950-201ENSMUST00000184438 73 ntBASIC1.67□□□□□ -2.14
P06344 Gm28257-201ENSMUST00000185244 463 ntBASIC1.67□□□□□ -2.14
P06344 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.67□□□□□ -2.14
P06344 Gm28717-201ENSMUST00000189950 315 ntBASIC1.67□□□□□ -2.14
P06344 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.67□□□□□ -2.14
P06344 Gm44960-201ENSMUST00000207403 141 ntBASIC1.67□□□□□ -2.14
P06344 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.67□□□□□ -2.14
P06344 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.67□□□□□ -2.14
P06344 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
P06344 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
P06344 Gm22685-201ENSMUST00000082848 106 ntBASIC1.67□□□□□ -2.14
P06344 Gm24907-201ENSMUST00000116932 128 ntBASIC1.66□□□□□ -2.14
P06344 Gm25509-201ENSMUST00000116985 106 ntBASIC1.66□□□□□ -2.14
P06344 Gm14803-201ENSMUST00000117163 361 ntBASIC1.66□□□□□ -2.14
P06344 Gm11859-201ENSMUST00000118099 455 ntBASIC1.66□□□□□ -2.14
P06344 Gm12351-201ENSMUST00000118727 292 ntBASIC1.66□□□□□ -2.14
P06344 Gm13518-201ENSMUST00000120018 233 ntBASIC1.66□□□□□ -2.14
P06344 Gm14980-201ENSMUST00000121247 736 ntBASIC1.66□□□□□ -2.14
P06344 Mir7017-201ENSMUST00000184894 62 ntBASIC1.66□□□□□ -2.14
P06344 Mir7678-201ENSMUST00000185076 71 ntBASIC1.66□□□□□ -2.14
P06344 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.66□□□□□ -2.14
P06344 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.66□□□□□ -2.14
P06344 Mir1291-201ENSMUST00000199842 117 ntBASIC1.66□□□□□ -2.14
P06344 Gm43505-201ENSMUST00000200579 139 ntBASIC1.66□□□□□ -2.14
P06344 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.66□□□□□ -2.14
P06344 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.66□□□□□ -2.14
P06344 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.66□□□□□ -2.14
P06344 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.66□□□□□ -2.14
P06344 Snord42a-201ENSMUST00000082606 65 ntBASIC1.66□□□□□ -2.14
P06344 Snora34-201ENSMUST00000083402 138 ntBASIC1.66□□□□□ -2.14
P06344 Gm26175-201ENSMUST00000083794 131 ntBASIC1.66□□□□□ -2.14
P06344 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.65□□□□□ -2.14
P06344 Gm24598-201ENSMUST00000122510 74 ntBASIC1.65□□□□□ -2.15
P06344 Gm23983-201ENSMUST00000157142 114 ntBASIC1.65□□□□□ -2.15
P06344 Gm17161-201ENSMUST00000169187 524 ntBASIC1.65□□□□□ -2.15
P06344 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.65□□□□□ -2.15
P06344 Gm25671-201ENSMUST00000178612 105 ntBASIC1.65□□□□□ -2.15
P06344 Gm23307-201ENSMUST00000179167 105 ntBASIC1.65□□□□□ -2.15
P06344 Gm25286-201ENSMUST00000179790 105 ntBASIC1.65□□□□□ -2.15
P06344 Gm28058-201ENSMUST00000186421 264 ntBASIC1.65□□□□□ -2.15
P06344 Gm43865-201ENSMUST00000204721 127 ntBASIC1.65□□□□□ -2.15
P06344 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
P06344 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
P06344 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
P06344 Gm13588-201ENSMUST00000120026 135 ntBASIC1.64□□□□□ -2.15
P06344 Gm11254-201ENSMUST00000122368 653 ntBASIC1.64□□□□□ -2.15
P06344 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
P06344 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.64□□□□□ -2.15
P06344 Gm24656-201ENSMUST00000177548 132 ntBASIC1.64□□□□□ -2.15
P06344 Gm24799-201ENSMUST00000178431 79 ntBASIC1.64□□□□□ -2.15
P06344 Mir6995-201ENSMUST00000183658 71 ntBASIC1.64□□□□□ -2.15
P06344 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.64□□□□□ -2.15
P06344 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.64□□□□□ -2.15
P06344 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.64□□□□□ -2.15
P06344 Gm22683-201ENSMUST00000082854 137 ntBASIC1.64□□□□□ -2.15
P06344 Gm25402-201ENSMUST00000082966 131 ntBASIC1.64□□□□□ -2.15
P06344 Gm24044-201ENSMUST00000083107 156 ntBASIC1.64□□□□□ -2.15
P06344 Mir300-201ENSMUST00000083485 79 ntBASIC1.64□□□□□ -2.15
P06344 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
P06344 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
P06344 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
P06344 Gm22193-201ENSMUST00000116868 76 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 117.7 ms