Protein–RNA interactions for Protein: P04230

H2-Eb1, H-2 class II histocompatibility antigen, E-B beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-Eb1P04230 Gm28848-201ENSMUST00000189984 168 ntBASIC1.44□□□□□ -2.18
H2-Eb1P04230 Gm19901-201ENSMUST00000192191 495 ntBASIC1.44□□□□□ -2.18
H2-Eb1P04230 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.44□□□□□ -2.18
H2-Eb1P04230 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.44□□□□□ -2.18
H2-Eb1P04230 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.44□□□□□ -2.18
H2-Eb1P04230 Snord118-201ENSMUST00000082965 135 ntBASIC1.44□□□□□ -2.18
H2-Eb1P04230 Gm24615-201ENSMUST00000083268 113 ntBASIC1.44□□□□□ -2.18
H2-Eb1P04230 Mir320-201ENSMUST00000083594 82 ntBASIC1.44□□□□□ -2.18
H2-Eb1P04230 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
H2-Eb1P04230 Gm14287-201ENSMUST00000121060 117 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Gm6956-201ENSMUST00000134724 546 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Gm23558-201ENSMUST00000157823 80 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Gm26405-201ENSMUST00000158495 100 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Mir3057-201ENSMUST00000175040 91 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Gm37054-201ENSMUST00000193481 543 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Gm43578-201ENSMUST00000201250 459 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Gm45815-201ENSMUST00000220241 146 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Gm24536-201ENSMUST00000083144 107 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Gm26314-201ENSMUST00000083891 107 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.43□□□□□ -2.18
H2-Eb1P04230 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
H2-Eb1P04230 Snord98-201ENSMUST00000116819 65 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Gm25541-201ENSMUST00000116888 126 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Gm11522-201ENSMUST00000120533 176 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Gm11606-201ENSMUST00000120706 617 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Gm11891-201ENSMUST00000121241 619 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Gm24085-201ENSMUST00000175172 116 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Gm26430-201ENSMUST00000178054 107 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Gm24390-201ENSMUST00000179578 62 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Mir6419-201ENSMUST00000184784 113 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Mir8090-201ENSMUST00000185078 136 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Gm43035-201ENSMUST00000197626 517 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Gm43427-201ENSMUST00000198188 331 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Gm45402-201ENSMUST00000211796 223 ntBASIC1.42□□□□□ -2.18
H2-Eb1P04230 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
H2-Eb1P04230 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
H2-Eb1P04230 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
H2-Eb1P04230 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
H2-Eb1P04230 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm6829-201ENSMUST00000119858 360 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm23230-201ENSMUST00000157298 133 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm22315-201ENSMUST00000158010 143 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm24393-201ENSMUST00000158135 97 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm25371-201ENSMUST00000158162 101 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm23016-201ENSMUST00000158431 62 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Rnu7-201ENSMUST00000158458 62 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm24005-201ENSMUST00000158459 296 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm17100-201ENSMUST00000168963 272 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm25314-201ENSMUST00000178810 79 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm27517-201ENSMUST00000184347 236 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
H2-Eb1P04230 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm45403-201ENSMUST00000209453 276 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.41□□□□□ -2.18
H2-Eb1P04230 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
H2-Eb1P04230 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.41□□□□□ -2.18
H2-Eb1P04230 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
H2-Eb1P04230 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
H2-Eb1P04230 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.4□□□□□ -2.19
H2-Eb1P04230 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.4□□□□□ -2.19
H2-Eb1P04230 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
H2-Eb1P04230 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.4□□□□□ -2.19
H2-Eb1P04230 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.4□□□□□ -2.19
H2-Eb1P04230 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.4□□□□□ -2.19
H2-Eb1P04230 Gm22027-201ENSMUST00000122737 127 ntBASIC1.4□□□□□ -2.19
H2-Eb1P04230 Gm23718-201ENSMUST00000157350 307 ntBASIC1.4□□□□□ -2.19
H2-Eb1P04230 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.4□□□□□ -2.19
H2-Eb1P04230 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.4□□□□□ -2.19
H2-Eb1P04230 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.4□□□□□ -2.19
H2-Eb1P04230 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.4□□□□□ -2.19
H2-Eb1P04230 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.4□□□□□ -2.19
H2-Eb1P04230 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.4□□□□□ -2.19
H2-Eb1P04230 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
H2-Eb1P04230 Snord68-201ENSMUST00000082516 86 ntBASIC1.4□□□□□ -2.19
H2-Eb1P04230 Snora3-201ENSMUST00000083082 132 ntBASIC1.4□□□□□ -2.19
H2-Eb1P04230 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
H2-Eb1P04230 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
H2-Eb1P04230 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
H2-Eb1P04230 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm11854-201ENSMUST00000117839 446 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm11512-201ENSMUST00000119669 663 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm22099-201ENSMUST00000157925 123 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm22136-201ENSMUST00000158751 268 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
H2-Eb1P04230 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm25253-201ENSMUST00000179958 107 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm28453-203ENSMUST00000187041 189 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm44387-201ENSMUST00000196298 145 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm44726-201ENSMUST00000203427 217 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm45365-201ENSMUST00000209489 256 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 Gm45456-201ENSMUST00000210841 243 ntBASIC1.39□□□□□ -2.19
H2-Eb1P04230 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms