Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm44182-201ENSMUST00000204052 115 ntBASIC2.54□□□□□ -2
Hcn3O88705 AL929417.1-201ENSMUST00000214901 124 ntBASIC2.54□□□□□ -2
Hcn3O88705 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.54□□□□□ -2
Hcn3O88705 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.54□□□□□ -2
Hcn3O88705 Gm9795-201ENSMUST00000062156 693 ntBASIC2.54□□□□□ -2
Hcn3O88705 Gm22299-201ENSMUST00000082663 136 ntBASIC2.54□□□□□ -2
Hcn3O88705 Gm26126-201ENSMUST00000083188 164 ntBASIC2.54□□□□□ -2
Hcn3O88705 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hcn3O88705 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hcn3O88705 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.53□□□□□ -2
Hcn3O88705 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Hcn3O88705 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
Hcn3O88705 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Hcn3O88705 Gm23747-201ENSMUST00000104228 131 ntBASIC2.53□□□□□ -2
Hcn3O88705 Gm23911-201ENSMUST00000104596 134 ntBASIC2.53□□□□□ -2
Hcn3O88705 Gm16021-201ENSMUST00000121176 219 ntBASIC2.53□□□□□ -2
Hcn3O88705 Gm22118-201ENSMUST00000175593 171 ntBASIC2.53□□□□□ -2
Hcn3O88705 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hcn3O88705 Gm43626-201ENSMUST00000198575 162 ntBASIC2.53□□□□□ -2
Hcn3O88705 Gm18346-201ENSMUST00000216782 325 ntBASIC2.53□□□□□ -2
Hcn3O88705 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.53□□□□□ -2
Hcn3O88705 Gm22358-201ENSMUST00000082877 122 ntBASIC2.53□□□□□ -2
Hcn3O88705 Gm25188-201ENSMUST00000083913 122 ntBASIC2.53□□□□□ -2
Hcn3O88705 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.53□□□□□ -2
Hcn3O88705 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hcn3O88705 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hcn3O88705 Mir466b-8-201ENSMUST00000103883 86 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 DQ267100-201ENSMUST00000122600 72 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Gm24627-201ENSMUST00000122764 138 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.52□□□□□ -2.01
Hcn3O88705 Gm23223-201ENSMUST00000158119 127 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Gm17166-201ENSMUST00000172006 431 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Gm28627-201ENSMUST00000186141 453 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Gm28921-201ENSMUST00000190219 378 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Mir466e-201ENSMUST00000198862 84 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Gm20144-201ENSMUST00000203031 165 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.52□□□□□ -2.01
Hcn3O88705 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Hcn3O88705 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Hcn3O88705 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.52□□□□□ -2.01
Hcn3O88705 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Hcn3O88705 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Hcn3O88705 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Hcn3O88705 Gm24374-201ENSMUST00000104394 106 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Gm25539-201ENSMUST00000116886 122 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Gm24896-201ENSMUST00000122741 135 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Gm22321-201ENSMUST00000157152 104 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Gm24053-201ENSMUST00000158620 105 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Gm23047-201ENSMUST00000177661 94 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Gm27786-201ENSMUST00000184337 70 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.51□□□□□ -2.01
Hcn3O88705 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Gm43993-201ENSMUST00000203972 247 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.51□□□□□ -2.01
Hcn3O88705 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hcn3O88705 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Hcn3O88705 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.5□□□□□ -2.01
Hcn3O88705 Gm23640-201ENSMUST00000157860 104 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm25711-201ENSMUST00000158633 128 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hcn3O88705 Mir28b-201ENSMUST00000175399 80 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Mir7242-201ENSMUST00000183710 79 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm2719-201ENSMUST00000191929 444 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm37089-201ENSMUST00000195616 129 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm44393-201ENSMUST00000197418 138 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm44666-201ENSMUST00000208544 391 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm45365-201ENSMUST00000209489 256 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm30534-201ENSMUST00000217928 207 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm22249-201ENSMUST00000082485 136 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Rny1-201ENSMUST00000083767 112 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Gm24163-201ENSMUST00000093660 132 ntBASIC2.5□□□□□ -2.01
Hcn3O88705 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Hcn3O88705 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Hcn3O88705 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Hcn3O88705 Gm23982-201ENSMUST00000157141 106 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 Gm23600-201ENSMUST00000157260 71 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 Gm26411-201ENSMUST00000157668 107 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 Gm22535-201ENSMUST00000158174 119 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 Gm20613-201ENSMUST00000175828 345 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 Gm25253-201ENSMUST00000179958 107 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Hcn3O88705 Mir1291-201ENSMUST00000199842 117 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 Mir7215-201ENSMUST00000200383 51 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 Gm43264-201ENSMUST00000202284 325 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.49□□□□□ -2.01
Hcn3O88705 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms