Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.81□□□□□ -2.12
ClppO88696 Mir7093-201ENSMUST00000184195 101 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm10105-201ENSMUST00000184601 270 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm29397-201ENSMUST00000185205 333 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm28058-201ENSMUST00000186421 264 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm37162-201ENSMUST00000191708 551 ntBASIC1.81□□□□□ -2.12
ClppO88696 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm26379-202ENSMUST00000200225 132 ntBASIC1.81□□□□□ -2.12
ClppO88696 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.81□□□□□ -2.12
ClppO88696 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.81□□□□□ -2.12
ClppO88696 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm22791-201ENSMUST00000157232 145 ntBASIC1.8□□□□□ -2.12
ClppO88696 Gm24478-201ENSMUST00000157439 158 ntBASIC1.8□□□□□ -2.12
ClppO88696 Gm24394-201ENSMUST00000158141 123 ntBASIC1.8□□□□□ -2.12
ClppO88696 Gm20462-201ENSMUST00000172623 408 ntBASIC1.8□□□□□ -2.12
ClppO88696 Gm28848-201ENSMUST00000189984 168 ntBASIC1.8□□□□□ -2.12
ClppO88696 Gm18291-201ENSMUST00000190791 301 ntBASIC1.8□□□□□ -2.12
ClppO88696 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.8□□□□□ -2.12
ClppO88696 Gm43427-201ENSMUST00000198188 331 ntBASIC1.8□□□□□ -2.12
ClppO88696 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.8□□□□□ -2.12
ClppO88696 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.8□□□□□ -2.12
ClppO88696 Snord68-201ENSMUST00000082516 86 ntBASIC1.8□□□□□ -2.12
ClppO88696 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.79□□□□□ -2.12
ClppO88696 Gm26249-201ENSMUST00000116708 118 ntBASIC1.79□□□□□ -2.12
ClppO88696 Gm11854-201ENSMUST00000117839 446 ntBASIC1.79□□□□□ -2.12
ClppO88696 Gm13432-201ENSMUST00000118861 241 ntBASIC1.79□□□□□ -2.12
ClppO88696 Gm25115-201ENSMUST00000157187 140 ntBASIC1.79□□□□□ -2.12
ClppO88696 Gm17161-201ENSMUST00000169187 524 ntBASIC1.79□□□□□ -2.12
ClppO88696 Mir6352-201ENSMUST00000184495 116 ntBASIC1.79□□□□□ -2.12
ClppO88696 Gm28211-201ENSMUST00000190920 315 ntBASIC1.79□□□□□ -2.12
ClppO88696 Gm23721-201ENSMUST00000083005 107 ntBASIC1.79□□□□□ -2.12
ClppO88696 Gm23731-201ENSMUST00000083749 107 ntBASIC1.79□□□□□ -2.12
ClppO88696 Gm23041-201ENSMUST00000083868 106 ntBASIC1.79□□□□□ -2.12
ClppO88696 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
ClppO88696 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.79□□□□□ -2.12
ClppO88696 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.79□□□□□ -2.12
ClppO88696 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
ClppO88696 Gm25938-201ENSMUST00000104139 166 ntBASIC1.78□□□□□ -2.12
ClppO88696 Gm25421-201ENSMUST00000104218 164 ntBASIC1.78□□□□□ -2.12
ClppO88696 Gm13396-201ENSMUST00000120617 271 ntBASIC1.78□□□□□ -2.12
ClppO88696 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.78□□□□□ -2.12
ClppO88696 Gm6956-201ENSMUST00000134724 546 ntBASIC1.78□□□□□ -2.12
ClppO88696 Gm24076-201ENSMUST00000158179 94 ntBASIC1.78□□□□□ -2.12
ClppO88696 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.78□□□□□ -2.12
ClppO88696 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.78□□□□□ -2.12
ClppO88696 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.78□□□□□ -2.12
ClppO88696 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.78□□□□□ -2.12
ClppO88696 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.78□□□□□ -2.12
ClppO88696 Gm24598-201ENSMUST00000122510 74 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm23718-201ENSMUST00000157350 307 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm23120-201ENSMUST00000157654 287 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm22113-201ENSMUST00000158343 104 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm16038-201ENSMUST00000159317 193 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm7953-201ENSMUST00000168278 469 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm20613-201ENSMUST00000175828 345 ntBASIC1.77□□□□□ -2.13
ClppO88696 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.77□□□□□ -2.13
ClppO88696 Gm27898-201ENSMUST00000183987 80 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.77□□□□□ -2.13
ClppO88696 Gm7654-201ENSMUST00000186738 683 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.77□□□□□ -2.13
ClppO88696 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.77□□□□□ -2.13
ClppO88696 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ClppO88696 Gm43431-201ENSMUST00000198577 340 ntBASIC1.77□□□□□ -2.13
ClppO88696 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.77□□□□□ -2.13
ClppO88696 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.77□□□□□ -2.13
ClppO88696 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm25636-201ENSMUST00000082666 133 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm23242-201ENSMUST00000083055 107 ntBASIC1.77□□□□□ -2.13
ClppO88696 Mir151-201ENSMUST00000083678 68 ntBASIC1.77□□□□□ -2.13
ClppO88696 Gm22365-201ENSMUST00000093750 117 ntBASIC1.77□□□□□ -2.13
ClppO88696 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
ClppO88696 Gm12351-201ENSMUST00000118727 292 ntBASIC1.76□□□□□ -2.13
ClppO88696 Gm25827-201ENSMUST00000157089 107 ntBASIC1.76□□□□□ -2.13
ClppO88696 Gm22338-201ENSMUST00000157715 129 ntBASIC1.76□□□□□ -2.13
ClppO88696 Gm23858-201ENSMUST00000158384 106 ntBASIC1.76□□□□□ -2.13
ClppO88696 Gm16162-201ENSMUST00000162296 297 ntBASIC1.76□□□□□ -2.13
ClppO88696 Gm23289-201ENSMUST00000175615 108 ntBASIC1.76□□□□□ -2.13
ClppO88696 Gm27410-201ENSMUST00000183851 115 ntBASIC1.76□□□□□ -2.13
ClppO88696 Mir7241-201ENSMUST00000184532 64 ntBASIC1.76□□□□□ -2.13
ClppO88696 Gm37399-201ENSMUST00000195224 416 ntBASIC1.76□□□□□ -2.13
ClppO88696 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.76□□□□□ -2.13
ClppO88696 Gm43238-201ENSMUST00000196463 359 ntBASIC1.76□□□□□ -2.13
ClppO88696 Gm33866-201ENSMUST00000196911 289 ntBASIC1.76□□□□□ -2.13
ClppO88696 Gm34783-201ENSMUST00000209159 303 ntBASIC1.76□□□□□ -2.13
ClppO88696 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.76□□□□□ -2.13
ClppO88696 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
ClppO88696 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.75□□□□□ -2.13
ClppO88696 Gm25090-201ENSMUST00000104000 132 ntBASIC1.75□□□□□ -2.13
ClppO88696 Gm14296-202ENSMUST00000108931 750 ntBASIC1.75□□□□□ -2.13
ClppO88696 Gm42606-201ENSMUST00000114209 239 ntBASIC1.75□□□□□ -2.13
ClppO88696 Gm13729-201ENSMUST00000120328 406 ntBASIC1.75□□□□□ -2.13
ClppO88696 Gm12926-201ENSMUST00000121158 409 ntBASIC1.75□□□□□ -2.13
ClppO88696 Gm23983-201ENSMUST00000157142 114 ntBASIC1.75□□□□□ -2.13
ClppO88696 Gm23435-201ENSMUST00000157183 156 ntBASIC1.75□□□□□ -2.13
ClppO88696 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.75□□□□□ -2.13
ClppO88696 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.75□□□□□ -2.13
ClppO88696 Gm25994-201ENSMUST00000175392 101 ntBASIC1.75□□□□□ -2.13
ClppO88696 Gm29005-201ENSMUST00000186773 320 ntBASIC1.75□□□□□ -2.13
ClppO88696 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
ClppO88696 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms