Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm36956-201ENSMUST00000193830 214 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm42855-201ENSMUST00000197388 253 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm38395-201ENSMUST00000199904 830 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm6369-201ENSMUST00000069626 412 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm9059-201ENSMUST00000118319 183 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm22482-201ENSMUST00000122563 359 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm23760-201ENSMUST00000158350 116 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.44□□□□□ -2.34
Hmgb3O54879 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm24154-201ENSMUST00000175261 130 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm26116-201ENSMUST00000175600 77 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm16404-201ENSMUST00000177739 468 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm7958-201ENSMUST00000178255 468 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm23267-201ENSMUST00000178490 132 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm7950-201ENSMUST00000179633 468 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm14598-201ENSMUST00000180109 468 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm14625-201ENSMUST00000180231 468 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm28257-201ENSMUST00000185244 463 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm44011-201ENSMUST00000203336 394 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.44□□□□□ -2.34
Hmgb3O54879 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 AC120553.1-201ENSMUST00000227313 260 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm22302-201ENSMUST00000082657 106 ntBASIC0.44□□□□□ -2.34
Hmgb3O54879 Gm14638-201ENSMUST00000121338 216 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm15529-201ENSMUST00000121833 994 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm29490-201ENSMUST00000190923 342 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm37713-201ENSMUST00000191746 198 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm44358-201ENSMUST00000196301 98 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm42475-201ENSMUST00000201212 295 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm44830-201ENSMUST00000207667 584 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.43□□□□□ -2.34
Hmgb3O54879 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm26228-201ENSMUST00000082512 107 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm25080-201ENSMUST00000082526 107 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm26203-201ENSMUST00000082911 114 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Mir196b-201ENSMUST00000083509 85 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm25518-201ENSMUST00000083864 107 ntBASIC0.43□□□□□ -2.34
Hmgb3O54879 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm24271-201ENSMUST00000102327 111 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm24340-201ENSMUST00000104208 97 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm25876-201ENSMUST00000104329 119 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm23203-201ENSMUST00000104374 107 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Mir293-201ENSMUST00000104841 80 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm25384-201ENSMUST00000157807 105 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm23568-201ENSMUST00000177960 92 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm20874-201ENSMUST00000178356 663 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm23619-201ENSMUST00000178411 94 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm9830-201ENSMUST00000178509 357 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm26435-201ENSMUST00000179026 107 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm25474-201ENSMUST00000179052 94 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm22047-201ENSMUST00000179176 94 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm24829-201ENSMUST00000179245 92 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm27898-201ENSMUST00000183987 80 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm8151-201ENSMUST00000184817 871 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm43432-201ENSMUST00000196352 121 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm18213-201ENSMUST00000207850 178 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 AC138667.2-201ENSMUST00000224880 598 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 AC154506.3-201ENSMUST00000225417 213 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm24311-201ENSMUST00000082570 104 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Snord33-201ENSMUST00000083694 84 ntBASIC0.42□□□□□ -2.34
Hmgb3O54879 Gm25938-201ENSMUST00000104139 166 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm25506-201ENSMUST00000104339 70 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm12507-201ENSMUST00000119155 415 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm11572-201ENSMUST00000119164 120 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm23535-201ENSMUST00000157542 106 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm26271-201ENSMUST00000158349 104 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm24084-201ENSMUST00000175173 137 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm25670-201ENSMUST00000178423 107 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm26239-201ENSMUST00000178842 107 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm24267-201ENSMUST00000179841 107 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Mir3569-201ENSMUST00000185080 58 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm37801-201ENSMUST00000194754 274 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm34015-201ENSMUST00000194908 451 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm44396-201ENSMUST00000199843 114 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm25131-201ENSMUST00000082653 151 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm24292-201ENSMUST00000082888 107 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm22229-201ENSMUST00000082987 108 ntBASIC0.41□□□□□ -2.34
Hmgb3O54879 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Hmgb3O54879 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.4□□□□□ -2.34
Hmgb3O54879 Gm24430-201ENSMUST00000104077 104 ntBASIC0.4□□□□□ -2.35
Hmgb3O54879 Gm13967-201ENSMUST00000120404 380 ntBASIC0.4□□□□□ -2.35
Hmgb3O54879 Gm13153-201ENSMUST00000120969 637 ntBASIC0.4□□□□□ -2.35
Hmgb3O54879 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
Hmgb3O54879 Gm25557-201ENSMUST00000158084 315 ntBASIC0.4□□□□□ -2.35
Hmgb3O54879 Gm25413-201ENSMUST00000158544 312 ntBASIC0.4□□□□□ -2.35
Hmgb3O54879 Gm16588-201ENSMUST00000162889 355 ntBASIC0.4□□□□□ -2.35
Hmgb3O54879 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
Hmgb3O54879 Gm28956-201ENSMUST00000189047 427 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms