Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm22621-201ENSMUST00000179678 74 ntBASIC2.34□□□□□ -2.03
DffbO54788 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.34□□□□□ -2.03
DffbO54788 Gm6801-201ENSMUST00000190697 339 ntBASIC2.34□□□□□ -2.03
DffbO54788 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.34□□□□□ -2.03
DffbO54788 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.34□□□□□ -2.03
DffbO54788 Gm5899-201ENSMUST00000071770 270 ntBASIC2.34□□□□□ -2.03
DffbO54788 Gm24164-201ENSMUST00000093663 104 ntBASIC2.34□□□□□ -2.03
DffbO54788 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
DffbO54788 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
DffbO54788 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
DffbO54788 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
DffbO54788 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm22939-201ENSMUST00000103958 131 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm25407-201ENSMUST00000104102 134 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm23013-201ENSMUST00000104146 106 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm22678-201ENSMUST00000116974 101 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm14602-201ENSMUST00000118625 340 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm12686-201ENSMUST00000120546 397 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm24787-201ENSMUST00000157380 123 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm23381-201ENSMUST00000157676 94 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm25888-201ENSMUST00000157778 302 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm22483-201ENSMUST00000157986 274 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm17166-201ENSMUST00000172006 431 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm28453-203ENSMUST00000187041 189 ntBASIC2.33□□□□□ -2.04
DffbO54788 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm19901-201ENSMUST00000192191 495 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm45543-201ENSMUST00000209327 88 ntBASIC2.33□□□□□ -2.04
DffbO54788 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
DffbO54788 Gm23615-201ENSMUST00000082602 65 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm25199-201ENSMUST00000083095 104 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm26126-201ENSMUST00000083188 164 ntBASIC2.33□□□□□ -2.04
DffbO54788 Gm23264-201ENSMUST00000083372 107 ntBASIC2.33□□□□□ -2.04
DffbO54788 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
DffbO54788 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
DffbO54788 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
DffbO54788 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
DffbO54788 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.32□□□□□ -2.04
DffbO54788 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
DffbO54788 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DffbO54788 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
DffbO54788 Gm23705-201ENSMUST00000104370 130 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm12797-201ENSMUST00000118645 273 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm14843-201ENSMUST00000119596 212 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm6574-201ENSMUST00000120037 362 ntBASIC2.32□□□□□ -2.04
DffbO54788 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm23599-201ENSMUST00000157261 251 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm22883-201ENSMUST00000157376 106 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm24480-201ENSMUST00000157442 103 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm23668-201ENSMUST00000157465 111 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm24573-201ENSMUST00000175499 112 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm20613-201ENSMUST00000175828 345 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm25933-201ENSMUST00000178943 108 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm25235-201ENSMUST00000179933 107 ntBASIC2.32□□□□□ -2.04
DffbO54788 Mir6353-201ENSMUST00000183596 113 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm28282-201ENSMUST00000186072 186 ntBASIC2.32□□□□□ -2.04
DffbO54788 Trbv18-201ENSMUST00000194256 294 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm43676-201ENSMUST00000197532 540 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm45907-201ENSMUST00000213023 193 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm24204-201ENSMUST00000082950 107 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm24042-201ENSMUST00000083114 103 ntBASIC2.32□□□□□ -2.04
DffbO54788 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.32□□□□□ -2.04
DffbO54788 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.31□□□□□ -2.04
DffbO54788 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
DffbO54788 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
DffbO54788 Gm13862-201ENSMUST00000121220 197 ntBASIC2.31□□□□□ -2.04
DffbO54788 Gm12815-201ENSMUST00000121737 135 ntBASIC2.31□□□□□ -2.04
DffbO54788 Gm14846-201ENSMUST00000121868 216 ntBASIC2.31□□□□□ -2.04
DffbO54788 Gm23258-201ENSMUST00000158319 106 ntBASIC2.31□□□□□ -2.04
DffbO54788 Gm24082-201ENSMUST00000175175 83 ntBASIC2.31□□□□□ -2.04
DffbO54788 Gm27694-201ENSMUST00000184740 86 ntBASIC2.31□□□□□ -2.04
DffbO54788 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.31□□□□□ -2.04
DffbO54788 Gm44393-201ENSMUST00000197418 138 ntBASIC2.31□□□□□ -2.04
DffbO54788 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.31□□□□□ -2.04
DffbO54788 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.31□□□□□ -2.04
DffbO54788 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.31□□□□□ -2.04
DffbO54788 Gm44903-201ENSMUST00000206840 130 ntBASIC2.31□□□□□ -2.04
DffbO54788 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.31□□□□□ -2.04
DffbO54788 Gm10092-201ENSMUST00000077110 180 ntBASIC2.31□□□□□ -2.04
DffbO54788 Gm25789-201ENSMUST00000083294 76 ntBASIC2.31□□□□□ -2.04
DffbO54788 Gm23039-201ENSMUST00000083870 161 ntBASIC2.31□□□□□ -2.04
DffbO54788 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
DffbO54788 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm23911-201ENSMUST00000104596 134 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm13885-201ENSMUST00000117569 187 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm12926-201ENSMUST00000121158 409 ntBASIC2.3□□□□□ -2.04
DffbO54788 DQ267100-201ENSMUST00000122600 72 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.3□□□□□ -2.04
DffbO54788 Gm24475-201ENSMUST00000157435 143 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm22433-201ENSMUST00000158550 142 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm24304-201ENSMUST00000177635 107 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm25024-201ENSMUST00000179667 104 ntBASIC2.3□□□□□ -2.04
DffbO54788 Mir6540-201ENSMUST00000184886 108 ntBASIC2.3□□□□□ -2.04
DffbO54788 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm29657-201ENSMUST00000189807 342 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm43220-201ENSMUST00000199299 282 ntBASIC2.3□□□□□ -2.04
DffbO54788 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC2.3□□□□□ -2.04
DffbO54788 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm22249-201ENSMUST00000082485 136 ntBASIC2.3□□□□□ -2.04
DffbO54788 Gm26458-201ENSMUST00000082832 128 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms