Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Gm22522-201ENSMUST00000158271 151 ntBASIC0.4□□□□□ -2.35
DffaO54786 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.4□□□□□ -2.35
DffaO54786 Gm37713-201ENSMUST00000191746 198 ntBASIC0.4□□□□□ -2.35
DffaO54786 Gm36956-201ENSMUST00000193830 214 ntBASIC0.4□□□□□ -2.35
DffaO54786 Gm31520-201ENSMUST00000203048 733 ntBASIC0.4□□□□□ -2.35
DffaO54786 Gm29848-201ENSMUST00000203107 295 ntBASIC0.4□□□□□ -2.35
DffaO54786 Gm40810-201ENSMUST00000219149 253 ntBASIC0.4□□□□□ -2.35
DffaO54786 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.4□□□□□ -2.35
DffaO54786 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.4□□□□□ -2.35
DffaO54786 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.4□□□□□ -2.35
DffaO54786 Mir10b-201ENSMUST00000083566 68 ntBASIC0.4□□□□□ -2.35
DffaO54786 Mir452-201ENSMUST00000093629 85 ntBASIC0.4□□□□□ -2.35
DffaO54786 Gm12102-201ENSMUST00000118251 604 ntBASIC0.39□□□□□ -2.35
DffaO54786 Gm24630-201ENSMUST00000122768 106 ntBASIC0.39□□□□□ -2.35
DffaO54786 Gm25491-201ENSMUST00000158733 308 ntBASIC0.39□□□□□ -2.35
DffaO54786 Gm23777-201ENSMUST00000158994 259 ntBASIC0.39□□□□□ -2.35
DffaO54786 Gm2962-201ENSMUST00000159266 336 ntBASIC0.39□□□□□ -2.35
DffaO54786 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
DffaO54786 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.39□□□□□ -2.35
DffaO54786 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.39□□□□□ -2.35
DffaO54786 Gm23862-201ENSMUST00000180342 94 ntBASIC0.39□□□□□ -2.35
DffaO54786 Gm29490-201ENSMUST00000190923 342 ntBASIC0.39□□□□□ -2.35
DffaO54786 Gm38395-201ENSMUST00000199904 830 ntBASIC0.39□□□□□ -2.35
DffaO54786 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.39□□□□□ -2.35
DffaO54786 Gm24311-201ENSMUST00000082570 104 ntBASIC0.39□□□□□ -2.35
DffaO54786 Gm23969-201ENSMUST00000083324 74 ntBASIC0.39□□□□□ -2.35
DffaO54786 Snord33-201ENSMUST00000083694 84 ntBASIC0.39□□□□□ -2.35
DffaO54786 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
DffaO54786 Gm25170-201ENSMUST00000104191 129 ntBASIC0.38□□□□□ -2.35
DffaO54786 Gm25876-201ENSMUST00000104329 119 ntBASIC0.38□□□□□ -2.35
DffaO54786 Gm14713-201ENSMUST00000122362 686 ntBASIC0.38□□□□□ -2.35
DffaO54786 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.38□□□□□ -2.35
DffaO54786 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
DffaO54786 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.38□□□□□ -2.35
DffaO54786 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.38□□□□□ -2.35
DffaO54786 Gm37709-201ENSMUST00000195074 600 ntBASIC0.38□□□□□ -2.35
DffaO54786 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
DffaO54786 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.37□□□□□ -2.35
DffaO54786 Gm24439-201ENSMUST00000157894 117 ntBASIC0.37□□□□□ -2.35
DffaO54786 Gm7925-201ENSMUST00000166690 401 ntBASIC0.37□□□□□ -2.35
DffaO54786 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.37□□□□□ -2.35
DffaO54786 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.37□□□□□ -2.35
DffaO54786 Gm20874-201ENSMUST00000178356 663 ntBASIC0.37□□□□□ -2.35
DffaO54786 Gm26914-201ENSMUST00000182262 223 ntBASIC0.37□□□□□ -2.35
DffaO54786 Mir6364-201ENSMUST00000183396 86 ntBASIC0.37□□□□□ -2.35
DffaO54786 Gm37757-201ENSMUST00000193072 210 ntBASIC0.37□□□□□ -2.35
DffaO54786 Gm19855-201ENSMUST00000210145 249 ntBASIC0.37□□□□□ -2.35
DffaO54786 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.37□□□□□ -2.35
DffaO54786 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.37□□□□□ -2.35
DffaO54786 CT030684.2-201ENSMUST00000228946 826 ntBASIC0.37□□□□□ -2.35
DffaO54786 Gm22575-201ENSMUST00000082981 110 ntBASIC0.37□□□□□ -2.35
DffaO54786 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
DffaO54786 Gm23435-201ENSMUST00000157183 156 ntBASIC0.36□□□□□ -2.35
DffaO54786 Gm26285-201ENSMUST00000177923 107 ntBASIC0.36□□□□□ -2.35
DffaO54786 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.36□□□□□ -2.35
DffaO54786 Gm37869-201ENSMUST00000193385 595 ntBASIC0.36□□□□□ -2.35
DffaO54786 Gm43898-201ENSMUST00000204456 424 ntBASIC0.36□□□□□ -2.35
DffaO54786 Gm18213-201ENSMUST00000207850 178 ntBASIC0.36□□□□□ -2.35
DffaO54786 Gm5899-201ENSMUST00000071770 270 ntBASIC0.36□□□□□ -2.35
DffaO54786 Gm23622-201ENSMUST00000082460 107 ntBASIC0.36□□□□□ -2.35
DffaO54786 Gm24045-201ENSMUST00000083113 98 ntBASIC0.36□□□□□ -2.35
DffaO54786 Gm23516-201ENSMUST00000093728 107 ntBASIC0.36□□□□□ -2.35
DffaO54786 Gm22759-201ENSMUST00000102276 96 ntBASIC0.35□□□□□ -2.35
DffaO54786 Gm25274-201ENSMUST00000104296 135 ntBASIC0.35□□□□□ -2.35
DffaO54786 Gm23321-201ENSMUST00000104465 126 ntBASIC0.35□□□□□ -2.35
DffaO54786 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.35□□□□□ -2.35
DffaO54786 Gm23008-201ENSMUST00000158946 80 ntBASIC0.35□□□□□ -2.35
DffaO54786 Gm24510-201ENSMUST00000174965 94 ntBASIC0.35□□□□□ -2.35
DffaO54786 Gm18396-201ENSMUST00000177095 361 ntBASIC0.35□□□□□ -2.35
DffaO54786 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
DffaO54786 Gm44396-201ENSMUST00000199843 114 ntBASIC0.35□□□□□ -2.35
DffaO54786 Gm44976-201ENSMUST00000205543 261 ntBASIC0.35□□□□□ -2.35
DffaO54786 Gm22306-201ENSMUST00000082692 107 ntBASIC0.35□□□□□ -2.35
DffaO54786 Gm26339-201ENSMUST00000102368 99 ntBASIC0.34□□□□□ -2.36
DffaO54786 Gm26249-201ENSMUST00000116708 118 ntBASIC0.34□□□□□ -2.36
DffaO54786 Gm13368-201ENSMUST00000122443 430 ntBASIC0.34□□□□□ -2.36
DffaO54786 Gm22796-201ENSMUST00000157234 106 ntBASIC0.34□□□□□ -2.36
DffaO54786 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.34□□□□□ -2.36
DffaO54786 Gm19901-201ENSMUST00000192191 495 ntBASIC0.34□□□□□ -2.36
DffaO54786 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.34□□□□□ -2.36
DffaO54786 Gm44358-201ENSMUST00000196301 98 ntBASIC0.34□□□□□ -2.36
DffaO54786 Gm42855-201ENSMUST00000197388 253 ntBASIC0.34□□□□□ -2.36
DffaO54786 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
DffaO54786 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.34□□□□□ -2.36
DffaO54786 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.34□□□□□ -2.36
DffaO54786 DQ267101-201ENSMUST00000082562 73 ntBASIC0.34□□□□□ -2.36
DffaO54786 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.33□□□□□ -2.36
DffaO54786 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.33□□□□□ -2.36
DffaO54786 Gm22817-201ENSMUST00000157448 356 ntBASIC0.33□□□□□ -2.36
DffaO54786 Gm24678-201ENSMUST00000158756 104 ntBASIC0.33□□□□□ -2.36
DffaO54786 Gm17100-201ENSMUST00000168963 272 ntBASIC0.33□□□□□ -2.36
DffaO54786 Gm24754-201ENSMUST00000177997 107 ntBASIC0.33□□□□□ -2.36
DffaO54786 Gm27668-201ENSMUST00000184188 120 ntBASIC0.33□□□□□ -2.36
DffaO54786 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
DffaO54786 Gm45232-201ENSMUST00000207811 162 ntBASIC0.33□□□□□ -2.36
DffaO54786 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.33□□□□□ -2.36
DffaO54786 Gm14884-201ENSMUST00000120456 196 ntBASIC0.32□□□□□ -2.36
DffaO54786 Gm24379-201ENSMUST00000122695 86 ntBASIC0.32□□□□□ -2.36
DffaO54786 Gm26484-201ENSMUST00000158018 106 ntBASIC0.32□□□□□ -2.36
DffaO54786 Gm22633-201ENSMUST00000179834 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms