Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm26038-201ENSMUST00000158151 106 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm22515-201ENSMUST00000158273 305 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm24668-201ENSMUST00000158935 104 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm2962-201ENSMUST00000159266 336 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Sdc4O35988 Gm29005-201ENSMUST00000186773 320 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm28912-201ENSMUST00000189001 234 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm44615-201ENSMUST00000206548 358 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm45878-201ENSMUST00000211839 241 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Sdc4O35988 Gm23060-201ENSMUST00000102345 109 ntBASIC0.61□□□□□ -2.31
Sdc4O35988 Gm22785-201ENSMUST00000104087 132 ntBASIC0.61□□□□□ -2.31
Sdc4O35988 Gm24588-201ENSMUST00000116696 83 ntBASIC0.61□□□□□ -2.31
Sdc4O35988 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.61□□□□□ -2.31
Sdc4O35988 Gm23317-201ENSMUST00000157999 129 ntBASIC0.61□□□□□ -2.31
Sdc4O35988 Gm9830-201ENSMUST00000178509 357 ntBASIC0.61□□□□□ -2.31
Sdc4O35988 Gm23862-201ENSMUST00000180342 94 ntBASIC0.61□□□□□ -2.31
Sdc4O35988 Gm9156-201ENSMUST00000189660 463 ntBASIC0.61□□□□□ -2.31
Sdc4O35988 Gm44491-201ENSMUST00000196794 96 ntBASIC0.61□□□□□ -2.31
Sdc4O35988 Gm42475-201ENSMUST00000201212 295 ntBASIC0.61□□□□□ -2.31
Sdc4O35988 AC164304.1-201ENSMUST00000226920 272 ntBASIC0.61□□□□□ -2.31
Sdc4O35988 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Sdc4O35988 Gm24282-201ENSMUST00000104232 66 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm22193-201ENSMUST00000116868 76 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm12507-201ENSMUST00000119155 415 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm22482-201ENSMUST00000122563 359 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm25544-201ENSMUST00000122676 120 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm22233-201ENSMUST00000157464 114 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm25868-201ENSMUST00000158253 114 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.6□□□□□ -2.31
Sdc4O35988 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Sdc4O35988 Gm24084-201ENSMUST00000175173 137 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm38060-201ENSMUST00000194822 464 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm44429-201ENSMUST00000203542 186 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.6□□□□□ -2.31
Sdc4O35988 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Gm24615-201ENSMUST00000083268 113 ntBASIC0.6□□□□□ -2.31
Sdc4O35988 Mir374b-201ENSMUST00000102314 95 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm26339-201ENSMUST00000102368 99 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm26074-201ENSMUST00000104063 129 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm15077-201ENSMUST00000122344 362 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm24481-201ENSMUST00000157210 102 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Sdc4O35988 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm26236-201ENSMUST00000175536 137 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm25670-201ENSMUST00000178423 107 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm26239-201ENSMUST00000178842 107 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
Sdc4O35988 Gm27974-201ENSMUST00000183415 105 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.59□□□□□ -2.31
Sdc4O35988 Gm43602-201ENSMUST00000196772 300 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm43035-201ENSMUST00000197626 517 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 AC138667.2-201ENSMUST00000224880 598 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 AC154506.3-201ENSMUST00000225417 213 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm24292-201ENSMUST00000082888 107 ntBASIC0.59□□□□□ -2.31
Sdc4O35988 Gm25416-201ENSMUST00000104221 107 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Gm22221-201ENSMUST00000157362 103 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Gm23034-201ENSMUST00000158001 147 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Rnu7-201ENSMUST00000158458 62 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Gm22945-201ENSMUST00000158557 157 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Gm7925-201ENSMUST00000166690 401 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Gm23419-201ENSMUST00000175523 84 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Gm5010-201ENSMUST00000213131 260 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 AC102291.2-201ENSMUST00000228083 367 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Gm22577-201ENSMUST00000083731 109 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 Mir452-201ENSMUST00000093629 85 ntBASIC0.58□□□□□ -2.32
Sdc4O35988 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.57□□□□□ -2.32
Sdc4O35988 Gm23422-201ENSMUST00000102000 107 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm22831-201ENSMUST00000102473 109 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm7916-201ENSMUST00000120325 456 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm11389-201ENSMUST00000121407 430 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm22817-201ENSMUST00000157448 356 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.57□□□□□ -2.32
Sdc4O35988 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.57□□□□□ -2.32
Sdc4O35988 Gm23568-201ENSMUST00000177960 92 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm24829-201ENSMUST00000179245 92 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm27421-201ENSMUST00000184729 167 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28110-201ENSMUST00000185782 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm29057-201ENSMUST00000186468 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28737-201ENSMUST00000186808 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm29147-201ENSMUST00000186846 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm29118-201ENSMUST00000186908 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28433-201ENSMUST00000187085 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm29227-201ENSMUST00000187139 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28759-201ENSMUST00000187621 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28831-201ENSMUST00000187739 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm29034-201ENSMUST00000188099 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28752-201ENSMUST00000188340 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28474-201ENSMUST00000188501 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28569-201ENSMUST00000188748 315 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms