Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm23858-201ENSMUST00000158384 106 ntBASIC2.56□□□□□ -2
Capn1O35350 Gm23268-201ENSMUST00000175494 78 ntBASIC2.56□□□□□ -2
Capn1O35350 Gm37377-201ENSMUST00000191733 304 ntBASIC2.56□□□□□ -2
Capn1O35350 Gm38060-201ENSMUST00000194822 464 ntBASIC2.56□□□□□ -2
Capn1O35350 Gm44482-201ENSMUST00000199232 103 ntBASIC2.56□□□□□ -2
Capn1O35350 Gm34314-201ENSMUST00000203622 367 ntBASIC2.56□□□□□ -2
Capn1O35350 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.56□□□□□ -2
Capn1O35350 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.56□□□□□ -2
Capn1O35350 Gm24625-201ENSMUST00000082622 130 ntBASIC2.56□□□□□ -2
Capn1O35350 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.56□□□□□ -2
Capn1O35350 Gm25321-201ENSMUST00000122558 102 ntBASIC2.55□□□□□ -2
Capn1O35350 Gm24879-201ENSMUST00000158386 143 ntBASIC2.55□□□□□ -2
Capn1O35350 Gm24837-201ENSMUST00000158683 81 ntBASIC2.55□□□□□ -2
Capn1O35350 Gm24736-201ENSMUST00000158862 130 ntBASIC2.55□□□□□ -2
Capn1O35350 Mir3092-201ENSMUST00000174954 96 ntBASIC2.55□□□□□ -2
Capn1O35350 Gm27878-201ENSMUST00000184000 106 ntBASIC2.55□□□□□ -2
Capn1O35350 Gm18357-201ENSMUST00000188184 580 ntBASIC2.55□□□□□ -2
Capn1O35350 Gm37889-201ENSMUST00000194174 251 ntBASIC2.55□□□□□ -2
Capn1O35350 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.55□□□□□ -2
Capn1O35350 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.55□□□□□ -2
Capn1O35350 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.55□□□□□ -2
Capn1O35350 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.55□□□□□ -2
Capn1O35350 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Capn1O35350 Gm24163-201ENSMUST00000093660 132 ntBASIC2.55□□□□□ -2
Capn1O35350 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.54□□□□□ -2
Capn1O35350 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.54□□□□□ -2
Capn1O35350 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Capn1O35350 Gm22486-201ENSMUST00000116815 137 ntBASIC2.54□□□□□ -2
Capn1O35350 Gm11854-201ENSMUST00000117839 446 ntBASIC2.54□□□□□ -2
Capn1O35350 Gm13880-201ENSMUST00000118421 474 ntBASIC2.54□□□□□ -2
Capn1O35350 Gm15272-201ENSMUST00000120865 233 ntBASIC2.54□□□□□ -2
Capn1O35350 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.54□□□□□ -2
Capn1O35350 Gm27271-201ENSMUST00000183509 170 ntBASIC2.54□□□□□ -2
Capn1O35350 Gm38019-201ENSMUST00000195133 380 ntBASIC2.54□□□□□ -2
Capn1O35350 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.54□□□□□ -2
Capn1O35350 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.54□□□□□ -2
Capn1O35350 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.54□□□□□ -2
Capn1O35350 Gm20144-201ENSMUST00000203031 165 ntBASIC2.54□□□□□ -2
Capn1O35350 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.54□□□□□ -2
Capn1O35350 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.54□□□□□ -2
Capn1O35350 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.54□□□□□ -2
Capn1O35350 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.54□□□□□ -2
Capn1O35350 Gm22299-201ENSMUST00000082663 136 ntBASIC2.54□□□□□ -2
Capn1O35350 Gm22972-201ENSMUST00000083297 131 ntBASIC2.54□□□□□ -2
Capn1O35350 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Capn1O35350 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Capn1O35350 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Capn1O35350 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Capn1O35350 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Capn1O35350 Mir344c-201ENSMUST00000103919 92 ntBASIC2.53□□□□□ -2
Capn1O35350 Gm23128-201ENSMUST00000104257 132 ntBASIC2.53□□□□□ -2
Capn1O35350 Gm11904-201ENSMUST00000120562 248 ntBASIC2.53□□□□□ -2
Capn1O35350 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Capn1O35350 Gm27379-201ENSMUST00000183730 123 ntBASIC2.53□□□□□ -2
Capn1O35350 Mir465d-201ENSMUST00000196314 58 ntBASIC2.53□□□□□ -2
Capn1O35350 Gm23128-202ENSMUST00000196578 133 ntBASIC2.53□□□□□ -2
Capn1O35350 Gm43993-201ENSMUST00000203972 247 ntBASIC2.53□□□□□ -2
Capn1O35350 mt-Td-201ENSMUST00000082404 70 ntBASIC2.53□□□□□ -2
Capn1O35350 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Capn1O35350 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.53□□□□□ -2.01
Capn1O35350 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Capn1O35350 Gm25875-201ENSMUST00000104323 107 ntBASIC2.52□□□□□ -2.01
Capn1O35350 Gm25500-201ENSMUST00000104426 123 ntBASIC2.52□□□□□ -2.01
Capn1O35350 Gm22027-201ENSMUST00000122737 127 ntBASIC2.52□□□□□ -2.01
Capn1O35350 Gm23983-201ENSMUST00000157142 114 ntBASIC2.52□□□□□ -2.01
Capn1O35350 Gm22321-201ENSMUST00000157152 104 ntBASIC2.52□□□□□ -2.01
Capn1O35350 Gm27747-201ENSMUST00000184707 85 ntBASIC2.52□□□□□ -2.01
Capn1O35350 Gm27332-201ENSMUST00000184893 112 ntBASIC2.52□□□□□ -2.01
Capn1O35350 Gm45543-201ENSMUST00000209327 88 ntBASIC2.52□□□□□ -2.01
Capn1O35350 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.52□□□□□ -2.01
Capn1O35350 Gm25930-201ENSMUST00000082785 107 ntBASIC2.52□□□□□ -2.01
Capn1O35350 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Capn1O35350 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Capn1O35350 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.52□□□□□ -2.01
Capn1O35350 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Capn1O35350 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Gm25808-201ENSMUST00000122784 284 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.51□□□□□ -2.01
Capn1O35350 Gm8121-201ENSMUST00000153583 499 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Gm22315-201ENSMUST00000158010 143 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Gm22537-201ENSMUST00000158172 199 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Gm23581-201ENSMUST00000158531 63 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Mir1936-201ENSMUST00000158699 93 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Gm27793-201ENSMUST00000183405 76 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Mir7242-201ENSMUST00000183710 79 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Gm29818-201ENSMUST00000218070 165 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Gm22866-201ENSMUST00000083947 177 ntBASIC2.51□□□□□ -2.01
Capn1O35350 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Capn1O35350 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Capn1O35350 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Capn1O35350 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Capn1O35350 Gm11786-201ENSMUST00000120799 155 ntBASIC2.5□□□□□ -2.01
Capn1O35350 Gm15379-201ENSMUST00000121224 648 ntBASIC2.5□□□□□ -2.01
Capn1O35350 Gm26479-201ENSMUST00000122620 106 ntBASIC2.5□□□□□ -2.01
Capn1O35350 Gm22281-201ENSMUST00000157198 103 ntBASIC2.5□□□□□ -2.01
Capn1O35350 Gm24922-201ENSMUST00000158511 102 ntBASIC2.5□□□□□ -2.01
Capn1O35350 Snord93-201ENSMUST00000175580 71 ntBASIC2.5□□□□□ -2.01
Capn1O35350 Gm26435-201ENSMUST00000179026 107 ntBASIC2.5□□□□□ -2.01
Capn1O35350 Gm27330-201ENSMUST00000184689 132 ntBASIC2.5□□□□□ -2.01
Capn1O35350 Gm28724-201ENSMUST00000186149 625 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms