Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.82□□□□□ -1.8
NpcdF8VQB8 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.82□□□□□ -1.8
NpcdF8VQB8 Gm25494-201ENSMUST00000158143 100 ntBASIC3.82□□□□□ -1.8
NpcdF8VQB8 Gm22989-201ENSMUST00000158313 86 ntBASIC3.82□□□□□ -1.8
NpcdF8VQB8 Mir5118-201ENSMUST00000175551 67 ntBASIC3.82□□□□□ -1.8
NpcdF8VQB8 Gm37281-201ENSMUST00000192412 439 ntBASIC3.82□□□□□ -1.8
NpcdF8VQB8 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.82□□□□□ -1.8
NpcdF8VQB8 Gm46993-201ENSMUST00000220708 259 ntBASIC3.82□□□□□ -1.8
NpcdF8VQB8 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.82□□□□□ -1.8
NpcdF8VQB8 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.82□□□□□ -1.8
NpcdF8VQB8 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NpcdF8VQB8 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
NpcdF8VQB8 Gm24937-201ENSMUST00000122597 134 ntBASIC3.81□□□□□ -1.8
NpcdF8VQB8 Gm23642-201ENSMUST00000157858 258 ntBASIC3.81□□□□□ -1.8
NpcdF8VQB8 Gm23476-201ENSMUST00000158881 274 ntBASIC3.81□□□□□ -1.8
NpcdF8VQB8 Mir5127-201ENSMUST00000175295 71 ntBASIC3.81□□□□□ -1.8
NpcdF8VQB8 Gm7258-201ENSMUST00000179317 300 ntBASIC3.81□□□□□ -1.8
NpcdF8VQB8 Gm43749-201ENSMUST00000199345 352 ntBASIC3.81□□□□□ -1.8
NpcdF8VQB8 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.81□□□□□ -1.8
NpcdF8VQB8 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.81□□□□□ -1.8
NpcdF8VQB8 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
NpcdF8VQB8 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NpcdF8VQB8 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NpcdF8VQB8 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 Gm20058-201ENSMUST00000186939 284 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 Gm32175-201ENSMUST00000193641 346 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 Trbv18-201ENSMUST00000194256 294 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 Gm43563-201ENSMUST00000196761 198 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 Snord80-202ENSMUST00000199023 77 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 AC153646.2-201ENSMUST00000220516 109 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 Gm19563-201ENSMUST00000222031 270 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 Gm9174-201ENSMUST00000078149 255 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 Gm25081-201ENSMUST00000082534 108 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.8□□□□□ -1.8
NpcdF8VQB8 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NpcdF8VQB8 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NpcdF8VQB8 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NpcdF8VQB8 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NpcdF8VQB8 Gm26249-201ENSMUST00000116708 118 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 Gm22713-201ENSMUST00000116895 130 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 Gm27379-201ENSMUST00000183730 123 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 Mir7009-201ENSMUST00000184519 64 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 Gm42834-201ENSMUST00000196845 256 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NpcdF8VQB8 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.79□□□□□ -1.8
NpcdF8VQB8 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NpcdF8VQB8 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NpcdF8VQB8 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NpcdF8VQB8 Gm12351-201ENSMUST00000118727 292 ntBASIC3.78□□□□□ -1.8
NpcdF8VQB8 Gm24440-201ENSMUST00000157236 63 ntBASIC3.78□□□□□ -1.8
NpcdF8VQB8 Gm22606-201ENSMUST00000158290 103 ntBASIC3.78□□□□□ -1.8
NpcdF8VQB8 Gm24512-201ENSMUST00000174963 65 ntBASIC3.78□□□□□ -1.8
NpcdF8VQB8 Gm23966-201ENSMUST00000179823 107 ntBASIC3.78□□□□□ -1.8
NpcdF8VQB8 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.78□□□□□ -1.8
NpcdF8VQB8 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.78□□□□□ -1.8
NpcdF8VQB8 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.78□□□□□ -1.8
NpcdF8VQB8 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
NpcdF8VQB8 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NpcdF8VQB8 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
NpcdF8VQB8 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NpcdF8VQB8 Gm25985-201ENSMUST00000122677 107 ntBASIC3.77□□□□□ -1.81
NpcdF8VQB8 Gm22532-201ENSMUST00000158822 140 ntBASIC3.77□□□□□ -1.81
NpcdF8VQB8 Gm24816-201ENSMUST00000175311 151 ntBASIC3.77□□□□□ -1.81
NpcdF8VQB8 Gm27470-201ENSMUST00000184070 210 ntBASIC3.77□□□□□ -1.81
NpcdF8VQB8 Mir721-201ENSMUST00000200230 88 ntBASIC3.77□□□□□ -1.81
NpcdF8VQB8 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NpcdF8VQB8 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NpcdF8VQB8 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm11356-201ENSMUST00000118974 192 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm13797-201ENSMUST00000121792 120 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm25625-201ENSMUST00000157221 96 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm24131-201ENSMUST00000158539 107 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm24878-201ENSMUST00000158782 104 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm22527-201ENSMUST00000158816 106 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm25457-201ENSMUST00000179509 107 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm18486-201ENSMUST00000184040 298 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm26265-202ENSMUST00000196326 133 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Snora19-201ENSMUST00000082962 132 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Gm23658-201ENSMUST00000083233 132 ntBASIC3.76□□□□□ -1.81
NpcdF8VQB8 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NpcdF8VQB8 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.75□□□□□ -1.81
NpcdF8VQB8 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NpcdF8VQB8 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.75□□□□□ -1.81
NpcdF8VQB8 Gm26423-201ENSMUST00000104277 128 ntBASIC3.75□□□□□ -1.81
NpcdF8VQB8 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.75□□□□□ -1.81
NpcdF8VQB8 Gm15733-201ENSMUST00000132957 242 ntBASIC3.75□□□□□ -1.81
NpcdF8VQB8 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms