Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm42774-201ENSMUST00000198854 283 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm2829-201ENSMUST00000213121 499 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm22620-201ENSMUST00000082700 133 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm24356-201ENSMUST00000082859 106 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Mir466b-8-201ENSMUST00000103883 86 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm26077-201ENSMUST00000104064 123 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm23600-201ENSMUST00000157260 71 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Shank1D3YZU1 Mir6353-201ENSMUST00000183596 113 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm19257-201ENSMUST00000186121 183 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm42570-201ENSMUST00000195937 292 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Mir466e-201ENSMUST00000198862 84 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Mir3087-201ENSMUST00000199405 56 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm44429-201ENSMUST00000203542 186 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.03□□□□□ -2.08
Shank1D3YZU1 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm24010-201ENSMUST00000157731 282 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm22556-201ENSMUST00000157803 100 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm24726-201ENSMUST00000158232 121 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm22951-201ENSMUST00000179471 107 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm24638-201ENSMUST00000179807 132 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm22443-201ENSMUST00000082890 107 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Shank1D3YZU1 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Shank1D3YZU1 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Shank1D3YZU1 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm11388-201ENSMUST00000120908 159 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm26004-201ENSMUST00000158804 116 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm37037-201ENSMUST00000194475 424 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm43286-201ENSMUST00000197420 424 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Gm22062-201ENSMUST00000082563 107 ntBASIC2.02□□□□□ -2.09
Shank1D3YZU1 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Shank1D3YZU1 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.01□□□□□ -2.09
Shank1D3YZU1 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Shank1D3YZU1 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Shank1D3YZU1 Gm23013-201ENSMUST00000104146 106 ntBASIC2.01□□□□□ -2.09
Shank1D3YZU1 Gm22713-201ENSMUST00000116895 130 ntBASIC2.01□□□□□ -2.09
Shank1D3YZU1 Mir1b-201ENSMUST00000117012 122 ntBASIC2.01□□□□□ -2.09
Shank1D3YZU1 Gm13725-201ENSMUST00000122139 207 ntBASIC2.01□□□□□ -2.09
Shank1D3YZU1 Gm16533-201ENSMUST00000140035 228 ntBASIC2.01□□□□□ -2.09
Shank1D3YZU1 Gm24908-201ENSMUST00000157294 127 ntBASIC2.01□□□□□ -2.09
Shank1D3YZU1 Gm44024-201ENSMUST00000203008 476 ntBASIC2.01□□□□□ -2.09
Shank1D3YZU1 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.01□□□□□ -2.09
Shank1D3YZU1 Gm25078-201ENSMUST00000082530 107 ntBASIC2.01□□□□□ -2.09
Shank1D3YZU1 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.01□□□□□ -2.09
Shank1D3YZU1 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Shank1D3YZU1 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Shank1D3YZU1 Gm11460-201ENSMUST00000118200 361 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm27396-201ENSMUST00000157708 58 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm22947-201ENSMUST00000158559 91 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm28744-201ENSMUST00000189939 340 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm43978-201ENSMUST00000203491 451 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm44524-201ENSMUST00000203899 271 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Shank1D3YZU1 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Shank1D3YZU1 Gm24582-201ENSMUST00000103967 103 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm24116-201ENSMUST00000103975 107 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm15526-201ENSMUST00000112504 204 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm24907-201ENSMUST00000116932 128 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm24818-201ENSMUST00000175093 161 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm23141-201ENSMUST00000178682 94 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm17067-202ENSMUST00000180131 123 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Mir6402-201ENSMUST00000183406 80 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Shank1D3YZU1 CT030166.2-201ENSMUST00000222021 368 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Gm26314-201ENSMUST00000083891 107 ntBASIC2□□□□□ -2.09
Shank1D3YZU1 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
Shank1D3YZU1 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Shank1D3YZU1 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Shank1D3YZU1 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm14774-201ENSMUST00000117857 536 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm14792-201ENSMUST00000119725 258 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm22321-201ENSMUST00000157152 104 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm24909-201ENSMUST00000157290 280 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm22447-201ENSMUST00000158155 92 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm23047-201ENSMUST00000177661 94 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm25253-201ENSMUST00000179958 107 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm27698-201ENSMUST00000184060 249 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Trbv6-201ENSMUST00000193743 276 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Mir3535-201ENSMUST00000197651 147 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm44960-201ENSMUST00000207403 141 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm24316-201ENSMUST00000083041 107 ntBASIC1.99□□□□□ -2.09
Shank1D3YZU1 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms