Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm23609-201ENSMUST00000104542 127 ntBASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Gm22966-201ENSMUST00000157957 129 ntBASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Gm15235-201ENSMUST00000200572 194 ntBASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Gm10025-201ENSMUST00000079568 372 ntBASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Gm25480-201ENSMUST00000083217 133 ntBASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Gm23697-201ENSMUST00000103897 110 ntBASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Gm22023-201ENSMUST00000104354 130 ntBASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Gm22678-201ENSMUST00000116974 101 ntBASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Gm11356-201ENSMUST00000118974 192 ntBASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Gm11704-201ENSMUST00000120031 214 ntBASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Ccdc9bA3KGF9 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Gm23747-201ENSMUST00000104228 131 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Gm22310-201ENSMUST00000157509 116 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Gm2189-201ENSMUST00000201419 429 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Gm44024-201ENSMUST00000203008 476 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Gm9712-201ENSMUST00000210842 311 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Gm22154-201ENSMUST00000083844 131 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Gm23040-201ENSMUST00000083869 163 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc9bA3KGF9 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Gm25464-201ENSMUST00000175481 107 ntBASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Gm24304-201ENSMUST00000177635 107 ntBASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Mir186-201ENSMUST00000083497 71 ntBASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc9bA3KGF9 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm25407-201ENSMUST00000104102 134 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm24141-201ENSMUST00000122776 115 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm25980-201ENSMUST00000157176 218 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Mir28b-201ENSMUST00000175399 80 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm20693-201ENSMUST00000177431 211 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm44476-201ENSMUST00000196225 91 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm36776-201ENSMUST00000207006 203 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm25815-201ENSMUST00000082755 107 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 AF357341-201ENSMUST00000083088 75 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm24977-201ENSMUST00000083106 163 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Gm25136-201ENSMUST00000083253 115 ntBASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc9bA3KGF9 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm23532-201ENSMUST00000104569 112 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm11471-201ENSMUST00000121824 198 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm22477-201ENSMUST00000122569 316 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm24896-201ENSMUST00000122741 135 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm26088-201ENSMUST00000157896 131 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm23260-201ENSMUST00000158317 172 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm26160-201ENSMUST00000158965 63 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Mir7k-201ENSMUST00000184115 110 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm5829-201ENSMUST00000191383 351 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm43217-201ENSMUST00000199513 367 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 Gm44425-201ENSMUST00000203739 429 ntBASIC3.26□□□□□ -1.89
Ccdc9bA3KGF9 CT025689.3-201ENSMUST00000223817 301 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms